| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_3748 |
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| Symbol | murE |
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| ID | 4479958 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 4505441 |
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| End bp | 4506922 |
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| Gene Length | 1482 bp |
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| Protein Length | 493 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639728361 |
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| Product | UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase |
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| Protein accession | YP_871372 |
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| Protein GI | 117922180 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0769] UDP-N-acetylmuramyl tripeptide synthase |
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| TIGRFAM ID | [TIGR01085] UDP-N-acetylmuramyl-tripeptide synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.00102722 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATGTTGT TAAGGGATCT ATTAGCGCCT TGGTTCCCCT ACGCGGGTGA ACAAACCTTC
TTAGAGTTGA CTTTAGATAG CCGCGCAATA CGTCGCGGCG ATGTGTTTTT AGCGCTGCCA
GGCCATAAGG TCGATGGTCG TCAATTTATC GATAAGGCCT TAGCCCAAGG TGCGACCGCG
GTATTAGTGC ATACGGATAA GATTGATGAG CAGGGCAAGG TGATTGCGAC TGAGCAAGGC
GTACAGATTT ATTTCTATCA GTTAGCTAGG CAAGTGTCTG CGGTCGCCGC AGTGCGTTAT
CCCGTTGTCC AAGGCCAGTC TATGGGCATT GTGGGAATTA CCGGCACCAA CGGCAAAACC
TCGACCAGTC AGCTCTGCGC ACAATTAGTG ACGCTACTTG AGGGTAAAGC GGCGGTGATG
GGCACGCTCG GCAATGGCCT CTGGGGCGAG TTAGTCGATA GCGGTAATAC CACCGCCGAT
GCCATTACCC TGATGCGCCA ACTACATGAG TTTGCAGACA AAGGCGTGAA TACCTGCGCG
ATGGAAGTCT CAAGTCATGG TTTAGTGCAA GGCCGAGTCG ATGCCGTGCC CTTCGATGTG
GCGGTATTCA CTAACTTGAC ACGTGATCAT TTGGACTATC ATGGCGATAT GGAAAACTAT
GCCGAGGCCA AGCAAATGCT GTTTCGCTTC GATTCCCTGC TTCATGGCTT AGTGAATCTC
GACGATCCCG TGGGTGCCGC TTGGTTATCC GAGCTGGCAA ATGTTCCCGC GAAAATGTGG
GGCTTTAGCA TTGAAGCGCA TACAGAGGTG GCGTTTTACA CTAAGAATGC CCAATTTAAC
GACCAAGGCG TGCAGGCGAC ACTTGTCTGG CCCGAGGGCG AAGTTGACAT TCGCTCTCCT
TTATTAGGCG CCTTTAACCT CTCGAATTTA CTCGCTGCTT TATCTGCCTT GTATTTACAG
GGTATGGATA TGCGTGCACT GGCATCCAAG GTGCCTTATT TAGTGCCCGT GGCTGGCCGC
ATGGAACGTT TTACCACTGC GGACAACATT ACCTTAGTCG TCGATTATGC CCATACCCCG
GATGCGATTG AGCAGGCGCT TAATGCCCTG CGTCGTCACT GCGCGGGCGA GTTGTGGTGC
GTGTTTGGTT GTGGCGGCGA CCGTGATAAG GGTAAACGCC CGCTGATGGG ACAAGCGGCG
GAGCAATGCG CCGATCGCAT TATGGTGACC AGCGATAATG CCCGCAGCGA AGATCCTAAC
CAAATTATTA CCGATATTAT CCAAGGGCTG ACTCACCCAG AGCGTGCGCT GACCGAGGTT
GACCGTGTAG CTGCGATTAA GCATGTCGTC GCGCAGGCTA AACCTGGGGA TGTGATTTTG
CTTGCGGGCA AAGGCCATGA AACTTACCAA GAGGCGGCAG GTGTGCGTCA TGACTATGAT
GAGCGCGCCC TGGCACGTCA GTTATCGGAG CAAAGCCAAT GA
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| Protein sequence | MMLLRDLLAP WFPYAGEQTF LELTLDSRAI RRGDVFLALP GHKVDGRQFI DKALAQGATA
VLVHTDKIDE QGKVIATEQG VQIYFYQLAR QVSAVAAVRY PVVQGQSMGI VGITGTNGKT
STSQLCAQLV TLLEGKAAVM GTLGNGLWGE LVDSGNTTAD AITLMRQLHE FADKGVNTCA
MEVSSHGLVQ GRVDAVPFDV AVFTNLTRDH LDYHGDMENY AEAKQMLFRF DSLLHGLVNL
DDPVGAAWLS ELANVPAKMW GFSIEAHTEV AFYTKNAQFN DQGVQATLVW PEGEVDIRSP
LLGAFNLSNL LAALSALYLQ GMDMRALASK VPYLVPVAGR MERFTTADNI TLVVDYAHTP
DAIEQALNAL RRHCAGELWC VFGCGGDRDK GKRPLMGQAA EQCADRIMVT SDNARSEDPN
QIITDIIQGL THPERALTEV DRVAAIKHVV AQAKPGDVIL LAGKGHETYQ EAAGVRHDYD
ERALARQLSE QSQ
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