| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_3747 |
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| Symbol | |
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| ID | 4479957 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 4504062 |
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| End bp | 4505444 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639728360 |
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| Product | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase |
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| Protein accession | YP_871371 |
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| Protein GI | 117922179 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0770] UDP-N-acetylmuramyl pentapeptide synthase |
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| TIGRFAM ID | [TIGR01143] UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.00102722 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATCCCAA TTTCCCTCGA GGCGCTGAGC CAACACTTAA GTGCGCATCG AGTCGGTGAC
GATGTCACCA TCCAAGCATT AAGCAGCGAT AGCCGTAAAA TCGGCCCTGC GACCCTGTTT
GTCGCCTTAA AGGGCGAGCG TTTCGACGGC CACGATTTTG CGGCCACGGC AATTGAGAAT
GGTGCCGTTG CACTGCTGGT TGAACGTCAA TTGGCCTTCG ATGTACCACA GCTTATTGTT
GCCGATTGCC AAAAGGCCAT GGGCGCGATT GGCGCCTATG TACGTGACCA AGTAGATCCC
ATTTGTGTGG CCCTAACCGG CTCCAATGGC AAAACCAGCG TTAAAGAAAT GATCGCCACG
ATTTTATCGG CGAAGCATCA AGTGCTTTAC ACCGCAGGTA ATTTTAATAA TGAAATCGGT
GTGCCACTTA CCTTGCTGCG CTTAACGTCT GAGGATAAGT ACGGGGTGTT TGAGCTTGGC
GCTAACCATA AAGGTGAGAT TGATTACACC TCGAGTTTGG TGCGTCCTCA CGTCGCCTTA
GTCAATAACG TTGGCAGCGC CCATTTAGAA GGCTTTGGTT CACAGGCGGG TGTCGCCCAG
GCCAAATCGG AAATCTACAA CCATCTGCAA CCCGGTGGCA CGGCGATTAT CAATGCCGAT
GATGCCTTTG CCGATGTGAT GCGGGTGAAA GCGAAACAAT ATAAGCAATT AAGTTTCTCC
CAACAGGAAG GCGCGGCTAA ACGTCAAATC GATGTGATTG CGACTGGCCA CAAAGCCAAT
AGCGAAGGTT GCTATCGCTT TATCCTTAAT TATGCGGGAG AGTCCTGCGA AGTGACTTTG
CCTCTCGCGG GTCGTCACCA GGTTAGCAAC GCGTTGGCTG CGGCAAGTGT TTGTATTGCT
TTAGGATTGA GCCTGAAGGA AATCGCCGAA GGCTTGAGCC AGTTGACCCC TGTTAAGGGA
CGTATGCAAC CAACTCAATT AGGACGCGTT CGCTTAATCG ATGATAGCTA TAACGCCAAT
CCCGTGTCAG TGGGTGCGGC TATCGCTTGG TTAAAGGAAA TTTCTGAAAA TCGCTGTTTG
GTACTGGGAG ATTTGGGCGA ATTAGGCGAC AATGCGCCCC TTTTACACGC TGAATTGGGA
CAACTGGCTA AGCAACAGGG AATCGATGCT CTGTTCTGTA CCGGCACCTT AACTCAGCAC
ACTAGTCAAG CTTTCGGGGC GGAGCACCAT GACAGCGTGG CGACGTTAGT AGAAAAACTC
ATAAAACACA TCAACCAGTT GCCGGGACAG GTGACGGTTT TAGTTAAAGG TTCACGTAGT
GCCGCAATGG AGCGGGTCGT GGATGGCCTA ACAGTAGCCT TCGGGCGTGG GGAGTTAGTG
TAG
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| Protein sequence | MIPISLEALS QHLSAHRVGD DVTIQALSSD SRKIGPATLF VALKGERFDG HDFAATAIEN
GAVALLVERQ LAFDVPQLIV ADCQKAMGAI GAYVRDQVDP ICVALTGSNG KTSVKEMIAT
ILSAKHQVLY TAGNFNNEIG VPLTLLRLTS EDKYGVFELG ANHKGEIDYT SSLVRPHVAL
VNNVGSAHLE GFGSQAGVAQ AKSEIYNHLQ PGGTAIINAD DAFADVMRVK AKQYKQLSFS
QQEGAAKRQI DVIATGHKAN SEGCYRFILN YAGESCEVTL PLAGRHQVSN ALAAASVCIA
LGLSLKEIAE GLSQLTPVKG RMQPTQLGRV RLIDDSYNAN PVSVGAAIAW LKEISENRCL
VLGDLGELGD NAPLLHAELG QLAKQQGIDA LFCTGTLTQH TSQAFGAEHH DSVATLVEKL
IKHINQLPGQ VTVLVKGSRS AAMERVVDGL TVAFGRGELV
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