| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_3745 |
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| Symbol | murD |
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| ID | 4479955 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 4501653 |
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| End bp | 4502972 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639728358 |
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| Product | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase |
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| Protein accession | YP_871369 |
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| Protein GI | 117922177 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0771] UDP-N-acetylmuramoylalanine-D-glutamate ligase |
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| TIGRFAM ID | [TIGR01087] UDP-N-acetylmuramoylalanine--D-glutamate ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.000131872 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCAAAGTC AGTATTCACA CATAGTGTTA GGTTTGGGTG CTACCGGGCT CTCGGTAGTG
CGCTATTTGT GTGGAAAAGG CATTACGCCC TTGGTGATGG ATAGTCGTCG CCAACCTCCA
GGTGCGGACA CCCTTGCCAG CGCATTCCCT GAGGTGCAGC TGATTGCCGG CGGATTCGAT
TGCCGTTACT TAGTGCAAGC GACGCAAATC ATTATCAGCC CAGGTATTGC GATTGATACG
CCCGAGGTGC GCGCGGCTCT GGATATGGGG ATTGAAGTCA TTGGCGATGT GGAGCTATTT
GCCCGTGAGA TTGCCGACCG TAAACCTTGT GTGATTGGGA TTACTGGCTC AAACGGCAAG
TCGACCGTCA CCACCTTAGT GGGTGAAATG CTGCGTGAAG CCGGCATGGC GGTGGCCGTG
GGGGGCAACA TTGGCATTCC GGCGCTCGAT CTGCTGACGG AAAATGCCGA TATTTTTGTG
CTTGAGCTGT CGAGCTTCCA ACTCGAAACC ACTCATAGCT TGAATTGCGT GGCGTCGACC
TGTTTGAACG TGACCGAAGA TCATATGGAC AGATACAGCG ATATGGATGC CTATCGCAAG
GCCAAGCTGC GTCTGTACCA TCAAAGCCGC TCCATCATCT TTAACCGTGA TGATGCGCTG
ACTATCCCTA CTGAGCCGAT GAACCAAAAC AGCTTTGGTT TAGCGCCGCC AGAGGGTGAT
GAGTGGGGCA TTTGTGATAG CAAGATTTAC CACGGTCACA GTGAAATTAT GCCGATCACC
GAAGTATCGC TGATTGGTAG TCATAACCAT GCCAACTTAC TCGCTGCTAT GGCGCTGGTG
TATGCCGTGG GCGTAGAGAA GCAAGTCATG GCTAAAGTGG CTCGTACCTT TACTGGCCTT
TCTCATCGCT GTGAAGTGGT CGGTGTGAAA GCGGGCGTGA CCTATGTGAA CGACTCTAAG
GCGACCAATG TTGGCGCCAC CGTCGCGGCG CTCGATGGGT TAAGCGATCA CTTAGGTGAC
ATTATTTTGA TTGCCGGTGG TGATGGTAAG GGCGCGGATT TCAGCCCGCT AGTCGAGCCG
TTAACGAAAG TGACACACCT CATCACCTTA GGTCGCGATG GTAATAAGAT AGCTGCATTG
AAGGAAGGGG CCATCAAGGT GGACTCTATG GCTGCTGCAG TGGCTAAGGC CGCCGAGTTA
GCCACCTCGG GCGATATCGT ACTCCTATCG CCAGCCTGTG CGAGCCTAGA TATGTACAGC
AATTTTATGG CTCGTGGGGA TGATTTTAGA AGCCAAGTGG AGCAACTCGA TGGCGAGTGA
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| Protein sequence | MQSQYSHIVL GLGATGLSVV RYLCGKGITP LVMDSRRQPP GADTLASAFP EVQLIAGGFD
CRYLVQATQI IISPGIAIDT PEVRAALDMG IEVIGDVELF AREIADRKPC VIGITGSNGK
STVTTLVGEM LREAGMAVAV GGNIGIPALD LLTENADIFV LELSSFQLET THSLNCVAST
CLNVTEDHMD RYSDMDAYRK AKLRLYHQSR SIIFNRDDAL TIPTEPMNQN SFGLAPPEGD
EWGICDSKIY HGHSEIMPIT EVSLIGSHNH ANLLAAMALV YAVGVEKQVM AKVARTFTGL
SHRCEVVGVK AGVTYVNDSK ATNVGATVAA LDGLSDHLGD IILIAGGDGK GADFSPLVEP
LTKVTHLITL GRDGNKIAAL KEGAIKVDSM AAAVAKAAEL ATSGDIVLLS PACASLDMYS
NFMARGDDFR SQVEQLDGE
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