| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_3738 |
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| Symbol | lpxC |
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| ID | 4479948 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 4493462 |
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| End bp | 4494382 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 639728351 |
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| Product | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase |
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| Protein accession | YP_871362 |
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| Protein GI | 117922170 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0774] UDP-3-O-acyl-N-acetylglucosamine deacetylase |
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| TIGRFAM ID | [TIGR00325] UDP-3-0-acyl N-acetylglucosamine deacetylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000675375 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.0000000285148 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATATTTC AAAGAACTGT TCAAAAAATG GTGAAGGCTA CTGGAGTCGG TTTGCACTCT
GGGAATAAGG TCACCTTGAG CATTATGCCC GCACCAGTCA ATACAGGGAT CGTACTCGTG
CGTACCGACA TGAATCCTGC CGTTGCTATT CCAGCAAAGG CGGAGCAAGT TCGCGAAACC
ACTATGTGCA CGGCACTTGT CAATGACGAA GGTATTCGTA TTTCGACTAT TGAGCATTTA
TTTGCAGCCT TAGCGGGTTT AGGCATTGAT AACGCCGTAA TCGAAGTGGA CGCGCCTGAA
ATCCCAATTA TGGATGGCAG TGCGAGCCCA TTTGTCTTCT TACTTCAGTC TGCGGGTATC
AAAGAGCAGG CTGCGCCTAA GAAGTACTTA AAGATTAAAC GCCCTGTGCG TGTTGAAGAC
GGTGATAAGT GGGCCGAGCT GAAGCCATTC AAAGGTTTTA GAGTCAACTT CAAAATTGAC
TTTGCTCACC CTGAAATTGC CCGTAGTCAA CAGCATGTGG TGATGGACTT CTCTACTTCT
GCTTTTGTTA AAGACATTAG CCGTGCCCGT ACTTTTGGTT TTATGCGTGA TATTGAGTAT
CTGCGTGCGA ACAACCTAGC ATTAGGTGGC AGCATGGAAA ACGCGGTTGT ACTTGATGAA
TATCGCGTCC TCAACCCCGA CGGCCTGCGT TATGAGGATG AGTTCGTTAA GCACAAAATT
TTAGATGCGT TTGGTGATCT CTACGTGGCA GGACACGCCA TTCTTGGTGA GTTTACTGCC
TATAAAACGG GTCATGCACT GAATAACCAA TTAGTGCGAG CCTTATTGGC GCAGCAGGAT
GCGTGGGAGC TGGTGAGCTT TGAGAAAGAA GCCGATGTTC CCGTCAGCTT TACTGTGCCA
GGTGGCGCGG TTTACGCTTA A
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| Protein sequence | MIFQRTVQKM VKATGVGLHS GNKVTLSIMP APVNTGIVLV RTDMNPAVAI PAKAEQVRET
TMCTALVNDE GIRISTIEHL FAALAGLGID NAVIEVDAPE IPIMDGSASP FVFLLQSAGI
KEQAAPKKYL KIKRPVRVED GDKWAELKPF KGFRVNFKID FAHPEIARSQ QHVVMDFSTS
AFVKDISRAR TFGFMRDIEY LRANNLALGG SMENAVVLDE YRVLNPDGLR YEDEFVKHKI
LDAFGDLYVA GHAILGEFTA YKTGHALNNQ LVRALLAQQD AWELVSFEKE ADVPVSFTVP
GGAVYA
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