| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_3727 |
|---|
| Symbol | |
|---|
| ID | 4479928 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. ANA-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008577 |
|---|
| Strand | + |
|---|
| Start bp | 4469495 |
|---|
| End bp | 4471144 |
|---|
| Gene Length | 1650 bp |
|---|
| Protein Length | 549 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 639728331 |
|---|
| Product | 2-octaprenylphenol hydroxylase |
|---|
| Protein accession | YP_871351 |
|---|
| Protein GI | 117922159 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0661] Predicted unusual protein kinase |
|---|
| TIGRFAM ID | [TIGR01982] 2-polyprenylphenol 6-hydroxylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCTTG CCAGTATCCG CCGCGGTTAT CATGTCATTA AAACCCTACT GCAATATGGG
TTAGATGACG TATTACCGCC AAAGATGACC CCTTGGTACT TTAAACTCGC CCGCAACAGC
CTGTTTTGGA TCCGCAACAA GCACAAAGGT AAATCCGGTG GCGAGCGTTT AAAGCTGGCG
ATGCAAGAGC TTGGTCCTGT GTATATTAAG CTCGGGCAAA TGCTGTCAAC CCGCCGTGAC
TTACTCAGCG ACGAATGGGC CAATGAACTT GCCATGTTGC AGGATAAAGT CCCGCCCTTC
GATGGCGCCT TGGCGCGCCA GGCGATTGAA GCCGAACTTA AAGCCCCCAT CGAGAGCTAC
TTCGACGACT TTGACGAAAC ACCCTTAGCC TCAGCCTCGA TTTCGCAAGT GCATACCGCC
ACGCTCAAAT CCAACGGCAA GGCCGTGGTC TTAAAAGTGC TGCGTCCGAA TGTAGAAACT
AAAATCCAAG CCGACTTATT GTTGATGTCG CAAACGGCTA AGGTCATCGA TTATCTCCTC
GGTGAAGGGA ATCGTCTGCG CCCCTCTGAG GTGATTGAAG ATTACCGCGT GACCATTCTA
GGTGAGCTCA ATCTTAAGCT TGAGGCACTC AATGCCATTA AGCTGCGCAA TAACTTCCTC
GACTCAGACG CGCTCTATAT TCCGTATGTC TACGAAGAGT TTTGCTATCC ACGTTTAATG
GTGATGGAGC GCATTTACGG TATTCCGGTA TCGGATATCG CCGCACTGAA GGCACAGGGC
ACTAACTTTA AACTCTTGGC CGAGCGTGGC GTAGAGCTGT TTTTCACCCA AGTGTTCCGC
GATAACTTTT TCCATGCCGA TATGCATCCA GGGAATATTT TTATCTCCCG CGAGCATCCT
GAGAATCCTT ATTATATCGG CCTAGATTGC GGCATTATGG GCACACTCAG CGAAGTCGAT
AAGCGCTATT TAGCGGAAAA CTTCCTCGCG TTTTTCAACC GTGATTACCA CCGTATCGCA
CAGCTGTATA TCGAGTCGGG TTGGGTATCG GAAAAAACCG ATCTGCAAGC CTTCGAACAA
GCCATCAAGG TGGTTTGTGA ACCTATGTTT AACAAGCCCT TAGATGAAAT ATCCTTCGGC
CATGTGTTAT TAGAACTGTT CCGCACCGCA CGCCACTTCG ATATCGTCGT GCAACCTCAG
CTCGTGCTGC TGGAGAAGAC ATTACTCTAT ATCGAAGGCT TAGGACGTCA GCTCTATCCG
CAGCTGGATC TCTGGCAAAC GGCGAAGCCC TTTTTAGAAC AGTGGATGGC CGAGCAAGTG
GGCCCTAAGG CAATGTTTAA AAAGGTATCC ACAAAACTGC CATATTGGTC TGATAAGCTT
CCGGAATTCC CTGAGCTAAT TTACGATAAC CTTAAATTAG GCAGGAAATT GCTGAGTTCT
CAGCAACAAA TGCTAGATAA GTATCTGAAA TATCAGCAGC AAGCACACAA GAGTAATTAC
TTGCTCATCA CTTCTGCAAT TTTATTGATC TGCGGCACGT TATTGTTCAA CCAAGACGCT
ACACTGTGGA GCCCTTACGT GTGTCTAATT TCAGGCGCGG TGTTGTGGAT TATCGGATGG
CGATCTAGGC CAAAGAATCG TAAATTTTAG
|
|---|
| Protein sequence | MTLASIRRGY HVIKTLLQYG LDDVLPPKMT PWYFKLARNS LFWIRNKHKG KSGGERLKLA
MQELGPVYIK LGQMLSTRRD LLSDEWANEL AMLQDKVPPF DGALARQAIE AELKAPIESY
FDDFDETPLA SASISQVHTA TLKSNGKAVV LKVLRPNVET KIQADLLLMS QTAKVIDYLL
GEGNRLRPSE VIEDYRVTIL GELNLKLEAL NAIKLRNNFL DSDALYIPYV YEEFCYPRLM
VMERIYGIPV SDIAALKAQG TNFKLLAERG VELFFTQVFR DNFFHADMHP GNIFISREHP
ENPYYIGLDC GIMGTLSEVD KRYLAENFLA FFNRDYHRIA QLYIESGWVS EKTDLQAFEQ
AIKVVCEPMF NKPLDEISFG HVLLELFRTA RHFDIVVQPQ LVLLEKTLLY IEGLGRQLYP
QLDLWQTAKP FLEQWMAEQV GPKAMFKKVS TKLPYWSDKL PEFPELIYDN LKLGRKLLSS
QQQMLDKYLK YQQQAHKSNY LLITSAILLI CGTLLFNQDA TLWSPYVCLI SGAVLWIIGW
RSRPKNRKF
|
|---|
| |