Gene Shewana3_3718 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3718 
Symbol 
ID4479919 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp4461356 
End bp4461967 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content49% 
IMG OID639728322 
ProductDedA family protein 
Protein accessionYP_871342 
Protein GI117922150 
COG category[S] Function unknown 
COG ID[COG0586] Uncharacterized membrane-associated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.913537 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAGAAG CCCTACAACA CCTAATCACC GAAATGACAC CTTGGTTGCA GCAATACGGT 
TATCTGCTGC TATTCGTGGC CATTGCCGTC GAGGGATTTG GGATTCCTGC ACCGGGCCAA
TCCTTACTGA TTGTTGCCAG TTTATTGGCC TCGACGGGGC AAATGTCGCT GCCATTAGTC
CTCATCGTTG CCTGCGCCGC CGCCCTGAGT GGCAACAGTT TAGGCTACTT TATCGGTCGC
CGCTTCGGTG AGGTATTGCT GCAAAAAGGT TGGATAAAGC CGCAGCTTGA GGACAAGATC
CACAGTGTGA TTGGCCAGTA TGGCATTGCA GCCTTAGTGC TCAGCCGCTT TGTCGAAGGG
CTTAAGCAGT TTATGTTTAT TGGCTGCGGC CTAGCCAAAA TGCCCTTTAA GCAATTCGTG
ATGGGCAACC TACTCGCCAC CAGCATTTGG GTAACGCTTT TTGGCTTAGG TCCAGTATTC
ATCCGCGATG AAATCGCCCC AATACTCGCG TTTTATCATC AACATAAATA CCCGACATGG
GCAATCGTTA GCCTGCTTTT AATCCTTTTA CTTCATTTTA GTTGGCGTAA ATTTCAGGTT
AAAAATCAGT AA
 
Protein sequence
MPEALQHLIT EMTPWLQQYG YLLLFVAIAV EGFGIPAPGQ SLLIVASLLA STGQMSLPLV 
LIVACAAALS GNSLGYFIGR RFGEVLLQKG WIKPQLEDKI HSVIGQYGIA ALVLSRFVEG
LKQFMFIGCG LAKMPFKQFV MGNLLATSIW VTLFGLGPVF IRDEIAPILA FYHQHKYPTW
AIVSLLLILL LHFSWRKFQV KNQ