| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_3715 |
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| Symbol | |
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| ID | 4479916 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 4457096 |
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| End bp | 4459534 |
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| Gene Length | 2439 bp |
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| Protein Length | 812 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639728319 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_871339 |
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| Protein GI | 117922147 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000223353 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTTCGT TCCAGCCTAA AGGTTACTCC ACATTGAGAG GTTTTATGCG TCCAGCCGTT
ATCGCATTAG CAGTATCTTC AACTTTGGTT TTTCCTGTCG TACACGCAGA AGAACAGGCC
AGCAGCTTTG AGAAAATTGA AGTCGTCGGC TCGCGGATCG CCCTGCGCAC CGCAACCGAC
AGCGTTGCCC CCGTCGATAT CATTACCGCG GAGCAACTCG AATCAACCGG TATGACCGAA
ACGGCTAAGG CGCTGCAATT TGCCGCGCCA AGTTACAGTT TCCCCTTCTC ATCGGTCACC
GATGGCTCAG ATGCGGTGCG CCCTGCTAGC TTACGCGGCC TGTCGCCAGA CCACACACTA
GTACTGGTAA ACGGTAAACG CCGCCATGGT TCGGCGCTGG TACATTTAAG CGGCACTGTC
GGCAAGGGCT CATCTAACGT CGATTTGAAC GCGATCCCGA TGACATCAAT TAAACGCATT
GAAATCCTGC GTGATGGCGC CTCGGCACAA TACGGCTCAG ATGCGATTGC CGGTGTTATC
AACGTAGTCT TAAAAGATAA CGACCAAGGC GGTAGCGTCT CGGCTCAAGC GGGACAGACC
TATTTGGGTG ACGGTGAACA ATGGCGCGTA GGAGTGAACC ACGGGATCAG CTTAAACAAC
GACGGTTTTG TGAATATTGG CGTCGAAGCT CACCATAAAG ACAGCACCAA CCGCGCAGGC
TTAGACCCTC GTCAACAATA TCCTAAGCTG CCAGACGGTT CAGATGATCC GCGCGAAGCA
ACATTCAACC GCAAGAGCCA CCAAGTCGGC GACGCCGAAT ACGATAACTT AGGCTTATTT
ATCAACGCGG CGCAGCCTTT CTCAAACGAC AGTAAACTCT ATGCCTTTGG TGGCATTAGC
CAGCGTGAAA CCAAATCCGG TGCTTTTTAT CGCCGCGCGC TCGATGCCCG TAACTTGACC
GAGCTGTATC CCGACGGCTT TTTACCGCAG ATCAATCCTA AGATCATCGA CTCATCATTA
GTCCTAGGCT ATGAGTTCAC CCTCGGTGAA TGGAATATCG ATACCTCAGC GGGCTATGGC
GGTAACTTGT TCGAATACAA CATTGTAAAC ACCCTAAACG CATCACTCGG CCCAGATAGC
CCGACGGAAT TCGATGCGGG CACACTGTCC ACCAGCGAAG CAAACCTGAA TATCGATGCC
TCGCGCTACT ATAACTTTGC CAATGACTCA GAGATCTTAG TGGCGACGGG TGTCTCTTGG
CGCCAAAACG GTTATCAGAT TGAGGCGGGC GAACCGGGTT CTTATATCAA TGGCGGTTAT
GATAACCGTG CAGCGGGCAG CCAAGGCTTC ACTGGCTTTA CGCCTGAATC AGAAGTCGAT
GAAACTCGCG ACAATACCGG TGTTTATGTT GAGCTTGAAA ACCAATTAAC CACAGAGTTT
TATTGGGCAG CGGCGCTGCG TTACGAAAAC TATTCTGACT TTGGTGGCAA CACCAGCTGG
AAGCTCGCAG GCCGTTACGA CTTCACCGAC CATTTAGCCC TGCGCGGCAC AGTGAACACA
GGCTTTAGAG CGCCGAGCGT ACAACAACTG TACTTCAGCA ATATCTCGAC CCTGTTCAAT
CCTGATCCGA CTACGGGCCA GTTAGTGCCA ACAGAATCAG GCACTTTCAA CACCTTATCG
CCAGTGACTG AGGCGCTAGG CATTAACGAG CTCGACCCAG AGCTGTCGCA ATCCTTCAGC
TTAGGCTTGG TGTACACCAA TGATACGGGC CTAGCCCTAA CCTTGGATGC CTATCAGATT
TCAATCGATG ACAGGATTAT CCTCTCAAGC TCAGTGACGC CAAACGACTC ACCGGCTGTT
GCGGCGGCGC TAGCCAATAC CAATGCAGAA TCGGCGCGCT TCTTTATTAA CGCCGTCGAT
ACTCGTACTC GCGGTGTTGA TTTAGTGGTG AGCCAAGATT TTGATCTCGG CAACTGGGGC
GATTTACGCG CCAACCTGGC ATACGCCTAT AACAAAACTG AAATCCAAGA TATTCATTTC
CCTGAAATTT TGGACGGACT CGGCCCTAAA CTCTTCGATA ATATCGAACA AACCCGCATG
ACCTCGGCCA CGCCGCACAA TACAGGTAAC CTAGGTCTGA CCCATGAATT AGGTGACTTT
AAGACTAATA TTCGCCTCAG CTACTTCGGC GATTACACTG TGGGTTACTC GACGGGTGAC
GTGAATTACA GTGACCAATG GGTGATGGAT TTATCCGTGC GCTACGCCGC AACCGATGCC
TTAAGCTTCA CCGCTGGTGT GCAAAACCTG TTTGATGTGT ATCCTGAAAA ACGCCCTGAT
GACAATAACT TCAATGGTAT TTTCGTCTAT CCGTTAACCA ATACACCGTT TGGATTTAAT
GGGGGATACT ACTTCCTCGA AGCCAAGTAT ACTTATTAA
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| Protein sequence | MFSFQPKGYS TLRGFMRPAV IALAVSSTLV FPVVHAEEQA SSFEKIEVVG SRIALRTATD
SVAPVDIITA EQLESTGMTE TAKALQFAAP SYSFPFSSVT DGSDAVRPAS LRGLSPDHTL
VLVNGKRRHG SALVHLSGTV GKGSSNVDLN AIPMTSIKRI EILRDGASAQ YGSDAIAGVI
NVVLKDNDQG GSVSAQAGQT YLGDGEQWRV GVNHGISLNN DGFVNIGVEA HHKDSTNRAG
LDPRQQYPKL PDGSDDPREA TFNRKSHQVG DAEYDNLGLF INAAQPFSND SKLYAFGGIS
QRETKSGAFY RRALDARNLT ELYPDGFLPQ INPKIIDSSL VLGYEFTLGE WNIDTSAGYG
GNLFEYNIVN TLNASLGPDS PTEFDAGTLS TSEANLNIDA SRYYNFANDS EILVATGVSW
RQNGYQIEAG EPGSYINGGY DNRAAGSQGF TGFTPESEVD ETRDNTGVYV ELENQLTTEF
YWAAALRYEN YSDFGGNTSW KLAGRYDFTD HLALRGTVNT GFRAPSVQQL YFSNISTLFN
PDPTTGQLVP TESGTFNTLS PVTEALGINE LDPELSQSFS LGLVYTNDTG LALTLDAYQI
SIDDRIILSS SVTPNDSPAV AAALANTNAE SARFFINAVD TRTRGVDLVV SQDFDLGNWG
DLRANLAYAY NKTEIQDIHF PEILDGLGPK LFDNIEQTRM TSATPHNTGN LGLTHELGDF
KTNIRLSYFG DYTVGYSTGD VNYSDQWVMD LSVRYAATDA LSFTAGVQNL FDVYPEKRPD
DNNFNGIFVY PLTNTPFGFN GGYYFLEAKY TY
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