Gene Shewana3_3708 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3708 
Symbol 
ID4479909 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp4449336 
End bp4450625 
Gene Length1290 bp 
Protein Length429 aa 
Translation table11 
GC content52% 
IMG OID639728312 
ProductATPase domain-containing protein 
Protein accessionYP_871332 
Protein GI117922140 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTAAGA TTTTAGGCAC CAATTTACAA GCCGCCGACC AAGTGGCGCT GCTTAGAACC 
TTAGGCTTAT TGCTGCAAAT TGGTTTGACG TTATTTGCCG CCGACACCTT TGGTTTGAGT
TTGCAAATGG AGCCGCTAGT GCATGTGTTT GTGCTGGAGG TGTTGTATTT GTCGCTCACC
TTGGCATTGC GTAAGCCCTT GTTTGCGAAA GAGCGTGGCC TGTTTATTGC CCTGAGTCTC
GATACCTTGT TTTGGATCTC TTGGCTGTAT TTTTCGGGCG GGGCGACCAA TGCGTTTATC
TCCTTACTGC TATTACCCAT AGCGCTCGCC GCCGTGACTC TGCCGATTTG GGCGCCTTGG
AGCCTAACGG CGATCTCTAC GCTTGCCTAT AGCCTGATGA TTTTTACCAT GCCAGAATCG
CAAATGCATC ACCACGGTAT GGATATGAGC TCCCACTATC TCGGCATGTG GTTTAACTTT
GTGATTTCGG CACTGGTATT GACCACTAGT GTGGCGTTAA TTGCCAAACG TATGCGCCGT
CAAGATGCGC AGCTTGCCTA TATGCGCGAA GGACAACTGC GGCAGGAGCA GTTATTGGCG
CTCGGCACCG TCTCGGCGCA AATGGCTCAC CAATTGGCGA CGCCGCTATC GACACTACGA
TTATTGCTCG ACGAATTAAG GGACGAACAA CCCGAACCTT CGGTCACGGT TGTTGAGATG
GAGACTGCAT TAGGTCGCTG TGAACATACC TTAACCGAGC TGCGGCTGGC GACTGAGTCG
ATTCGCGACC GTCGTCAGCG GCCACAAAAG ATCACTGAGC TGGTGGCCGG ATTAAAGCAG
AAAACCCAAT TATTGATGCC GCAAACTGAG CTCAATTGGT TGATCACCTG CGCACCTCAG
CAGTTGGAAG AACAGCAGAT CTTAACCGAT ATGAGCTTAA CCCCAGCCAT TATGGCCTTG
ATTGAAAATG CCGCCCGCGC CAGCGCCGAA ACCTTAGGCG TCGCCCAAGT GGATATCAGC
CTAGATAGCG CGCCGAGAGA AGGGCAGATC TATTTGCAGA TCCGTGATTA TGGCGCGGGT
ATCGCTCCCT CATTATTGCC ACAATTGGGG ACCTTATTAA TCGAGAGCCC CAAAGGTTTA
GGCGTGGCCT TGCTGCTGAG CCATGCCAGC CTCGAGCGTT TGGGGGCAGA GTTGATCCTC
GCCAATCATC CTCAAGGGGG CACTGTGGCG CAAATTCGTT TTACCCTCTT GCAGCCTAAT
GTATCGGCCA CGACGACGGA GGCGCTATGA
 
Protein sequence
MVKILGTNLQ AADQVALLRT LGLLLQIGLT LFAADTFGLS LQMEPLVHVF VLEVLYLSLT 
LALRKPLFAK ERGLFIALSL DTLFWISWLY FSGGATNAFI SLLLLPIALA AVTLPIWAPW
SLTAISTLAY SLMIFTMPES QMHHHGMDMS SHYLGMWFNF VISALVLTTS VALIAKRMRR
QDAQLAYMRE GQLRQEQLLA LGTVSAQMAH QLATPLSTLR LLLDELRDEQ PEPSVTVVEM
ETALGRCEHT LTELRLATES IRDRRQRPQK ITELVAGLKQ KTQLLMPQTE LNWLITCAPQ
QLEEQQILTD MSLTPAIMAL IENAARASAE TLGVAQVDIS LDSAPREGQI YLQIRDYGAG
IAPSLLPQLG TLLIESPKGL GVALLLSHAS LERLGAELIL ANHPQGGTVA QIRFTLLQPN
VSATTTEAL