| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_3707 |
|---|
| Symbol | |
|---|
| ID | 4479908 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. ANA-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008577 |
|---|
| Strand | - |
|---|
| Start bp | 4448788 |
|---|
| End bp | 4449339 |
|---|
| Gene Length | 552 bp |
|---|
| Protein Length | 183 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 639728311 |
|---|
| Product | response regulator receiver protein |
|---|
| Protein accession | YP_871331 |
|---|
| Protein GI | 117922139 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG4567] Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACGGC TATTGATTAT TGAAGACGAT CAGGCTCTTG CAGGCGTGCT TGCGCGGCGC
TTGACTCGCC ATGGTTTCGA ATGTCGCTTA AGTCACGATG CCAGTAATGC GCTGCTGGTG
GCGCGGGAAT TTTGCCCTAG CCATATTTTG CTGGATATGA AACTGGCAGA GGCCAATGGC
CTGAGCTTAA TCGTGCCCCT GCGTAATCTG TTGCCTAAGG TGATTATGGT GTTGCTAACG
GGCTACGCCA GCATTGCTAC GGCGGTAGAG GCGATTCGCC TCGGCGCGGA TAACTATCTT
GCCAAACCCG TCGATACCCA AACCTTGTTG GCGGCCTTCG AGGTCAATAG TCAGGCGAGC
GCGCTGCCAG AAGATGAAAT CGACGACTCG CCACTCAGCC CTAAACGGCT GGAATGGGAG
CATATTCAGC AAGTGCTCAA TGCCAATCAA GGCAATGTGT CGGCTACCGC TCGCCAACTG
GGTATGCACC GCCGTACCTT GCAGCGTAAG TTATTAAAGA AACCCGTGAG TGAAACCGGG
CCGCTCAAGT AA
|
|---|
| Protein sequence | MKRLLIIEDD QALAGVLARR LTRHGFECRL SHDASNALLV AREFCPSHIL LDMKLAEANG
LSLIVPLRNL LPKVIMVLLT GYASIATAVE AIRLGADNYL AKPVDTQTLL AAFEVNSQAS
ALPEDEIDDS PLSPKRLEWE HIQQVLNANQ GNVSATARQL GMHRRTLQRK LLKKPVSETG
PLK
|
|---|
| |