| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_3705 |
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| Symbol | |
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| ID | 4479906 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 4447529 |
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| End bp | 4448239 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 639728309 |
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| Product | C factor cell-cell signaling protein |
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| Protein accession | YP_871329 |
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| Protein GI | 117922137 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATATTT TGGTATTAGG TGGCAGCGGT GGCATAGGTC ACGCCATGGT GAATAAGCTG
CGCGAAACCT ATCCTGAGGC CATAATTCAT GCGACCTATA GACATCATCA GCCAGATACA
GGGCGAGACG ATGGCGTTAT CTGGCATCAG CTGGATATCA CCCTTGAGGA GGGGGTTAAG
CAACTGAGTC AAAACATTCC CCAATTAGAT TGGCTAATCA ACTGTATTGG GATGCTGCAC
ACAGAGGATA AGGGGCCAGA AAAAAGCGTG CAGGCTGTCG ATGGGGATTT TTTCCTGCAC
AATATCAAGC TAAACACGCT TCCCAGTATG GTGTTGGCAA AGCACTTTGA ATCGGCGTTA
AAACGCAGTG CGTCGGCAAG GTTTGCCGTA GTGTCGGCCA AAGTTGGCAG CATTAGTGAT
AACAGATTAG GCGGTTGGTA CAGCTATCGC GCCTCGAAAG CGGCGCTGAA TATGTTCCTT
AAAACGCTAT CGATTGAATG GCAAAGAACG ATGAAACACT GCGTGGTGCT ATCACTGCAT
CCCGGCACTA CGGATACGCG ATTATCCAAA CCTTTTCAGC AGAACGTGCC CAAACAAAAG
CTGTTTACAC CAGAGTACGT CGCCCAATGT TTGGTGAGTA TTATCGCCAA TGCCACACCA
GCACAAACGG GCAGCTTTTT GGCCTACGAT GGTGCTGAGC TGCCTTGGTA G
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| Protein sequence | MNILVLGGSG GIGHAMVNKL RETYPEAIIH ATYRHHQPDT GRDDGVIWHQ LDITLEEGVK
QLSQNIPQLD WLINCIGMLH TEDKGPEKSV QAVDGDFFLH NIKLNTLPSM VLAKHFESAL
KRSASARFAV VSAKVGSISD NRLGGWYSYR ASKAALNMFL KTLSIEWQRT MKHCVVLSLH
PGTTDTRLSK PFQQNVPKQK LFTPEYVAQC LVSIIANATP AQTGSFLAYD GAELPW
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