Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_3696 |
Symbol | |
ID | 4479897 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 4436758 |
End bp | 4438536 |
Gene Length | 1779 bp |
Protein Length | 592 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 639728300 |
Product | histidine kinase |
Protein accession | YP_871320 |
Protein GI | 117922128 |
COG category | [P] Inorganic ion transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG3221] ABC-type phosphate/phosphonate transport system, periplasmic component [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGTTGCA TCTTGAGCCT AATGGGGCTC AATTTGTCCT ATGCCGATGA GGACATTACC CTGAATGAAT TTAAAGTGGG GGTATTGGCC AATCATGGCG TGTTACAGGC GAAACAACGC TGGCAGCCAA TGATGGATTA TCTCAGCGAA AAAGTCCCCA ATAGCCGTTT CGAAGTGGTG CCAGTGGATT TTAATGGCAT GCGCAGCCAA CTACTTAGCC ACGATTTGCA ATTTATTGTC ACCAACCCCG GCCAGTATCT GCACTTGAGT AATAACTTTC CGCTCTCGTG GTTGGCGACC ATGAAGAGTC GTAAGCATCA GGGCAGCACT TTTACCATAG GCGCGACCAT TATTGTGCGT GCCGATAGTC CAATCCGCAG TTTGCAGGAT TTACGGGGTA AGAATGTGGT TGCCAGCGAT CCGCAGGCAC TCGGTGGCTA TCAGGCGGCG ATGGGACTGC TGCATAAAAT GGGTTATCTG CCGGAGCAGT TTTTCGGTGA CGTGCGATTC TTAGGTTTTC CCCTCGAGCC GTTAATCTAC CAAGTGCGCG ATGGCAATGC CGACGCTGCC ATTGCGCCTT TTTGTACCTT AGAGGAGATG ATTGAAACCG GGCTTATCAA TCAGGTCGAC TATCGGGTTA TTCATCCAAC CAATCCGCCT GGCTATGATT GCGAGGTGAG CACTCAGCTC TATCCCAACT GGTCATTTGC GGCGGCGGAT ACAGTATCGC CGCGGATTAC CATGCAAATC ACCCGTGCTT TGTTTGACTT GCCCGCCGAT CATGCGGCGG CGATTACCGC CGATACCTTA GGTTGGACGG CACCAGTGAG CCAGCTCAAG GTGATTGAGT TATTTAAAGA ATTACAGCTT CAAGGCGCGT CGCCGCCCCT GTATCAAACC GTCTATAAAT GGATGGAGAA AAACAAAGAG TGGGGCGGGG TATTGCTGCT GATCTTTATC GTATCGACCA TTTATCACCT GTGGCTCGAG TATAAATTTC GCCAAAAGAG CGAGTTTTTG GTCAGCACTG AACGGCAGTT AAAGGATAAA GCCTTGCAGC TAGAGCGGTT GCAGAGTGCG GCGATTCTCG GGGAGATTGG CGCGGGCTTA GCCCATGAGT TAAATCAACC CATAGCCGCC ATTACTCAAT ACAGTGAAGG CGCCATGATA CAGCTAGAAA GACTGGGACA GGATAATCCT GAACTCTATG ATATTTTAGG TAAAATCAAC GCGCAATCGA TACGGGCGGG GGCAGTTGTG CACCGTATTC GCGGTTTGCT TAAGCGCCGT CAGGCCAAGG CTGAATCGCT GAATGTCACC TTAGTGGTCA AAGAGGCCCT CGCCCTACTG CGACGTGAGT TAGACCGCGC CGAGGTACAA GTGACGCTAC AAGTCGAAGG TCATCCCTTT GAATTGATGG GCGACAGCGT TGGCCTCAGC CAAATGTGGG TCAACCTAGT GAAAAACAGT CTCGATGCGC TGGAGGCCTG CAAGGATAAC CGCGCACGGC AGCTAAGGAT TGAGATCTAT TATCACTCTA GTGAAATCAA AGTATTAGTC ATAGATAATG GCGAAGGTTT ACAGCGCCAA GCCAGCGAGT TAATGGCCTC GTTTGCCTCC ACCAAGGATG CGGGGCTCGG TTTGGGCTTA GCAATTTGTA AAGATGTCGT CAGCCGCCAC CATGGCAGTA TTCAAATTGA AAATTGTCAG CAATCGACAC ATGCCAGATT GCCTTGGCAA CAGGGCTGCG TGGTAACTGT GGTGCTACCT AAAGGTTAG
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Protein sequence | MSCILSLMGL NLSYADEDIT LNEFKVGVLA NHGVLQAKQR WQPMMDYLSE KVPNSRFEVV PVDFNGMRSQ LLSHDLQFIV TNPGQYLHLS NNFPLSWLAT MKSRKHQGST FTIGATIIVR ADSPIRSLQD LRGKNVVASD PQALGGYQAA MGLLHKMGYL PEQFFGDVRF LGFPLEPLIY QVRDGNADAA IAPFCTLEEM IETGLINQVD YRVIHPTNPP GYDCEVSTQL YPNWSFAAAD TVSPRITMQI TRALFDLPAD HAAAITADTL GWTAPVSQLK VIELFKELQL QGASPPLYQT VYKWMEKNKE WGGVLLLIFI VSTIYHLWLE YKFRQKSEFL VSTERQLKDK ALQLERLQSA AILGEIGAGL AHELNQPIAA ITQYSEGAMI QLERLGQDNP ELYDILGKIN AQSIRAGAVV HRIRGLLKRR QAKAESLNVT LVVKEALALL RRELDRAEVQ VTLQVEGHPF ELMGDSVGLS QMWVNLVKNS LDALEACKDN RARQLRIEIY YHSSEIKVLV IDNGEGLQRQ ASELMASFAS TKDAGLGLGL AICKDVVSRH HGSIQIENCQ QSTHARLPWQ QGCVVTVVLP KG
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