| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_3685 |
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| Symbol | |
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| ID | 4479886 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 4423871 |
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| End bp | 4425409 |
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| Gene Length | 1539 bp |
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| Protein Length | 512 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 639728290 |
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| Product | Sel1 domain-containing protein |
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| Protein accession | YP_871310 |
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| Protein GI | 117922118 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGTTGA TACTTATCAT TATAGCCTTT GTCGTTCTGT TTATTCTTTT TGCCAAATAC
CAAAAAAAGA AGATACAAGC CGAAGCGCTT GCCACGGGGG AACCCTCGGC GCTACTCAAT
CACGGACTCA CATTAATCAA TCAGGGCGAA GTCAACTCGG GCCTAGACTA TATTCAGCAG
GCCGTTGATA AAGGCTTCGC CGTAGCCGCC ATTGCCATGG CCGAGCTGTA TTCGGGTCGA
TTCCCACAAG TCCCCGCCGA TCCTAAGGCA TCTGAATATT GGTATCGAAA AGCCGCCGAA
ATCGATCCGC AATATTTACC CATGCTCACC CTGACTAGCT TGGTCGCCTC AGAGGCGCAA
ACACCAGAGC AGTTACGCGA GCAGGTAGAA CAACTCAAAG CCAGTGCTGA AGTGGGGCAA
GTCGAGTTTC AATATGAGCT CGCCTATTTG TATCTCAGAC AAGCCTTTCT CGATCCCGAT
GCAAGCCAAG CCATTTACTG GTTCGAAAAG GCGGCCGCCC AAGGCAACCA AGATGCCTAT
TACCACTTAG GTACGCTGTA TTGGCACGAT GAACGTGTCA CGCCAGACTA TAGCAAAGCG
CGGGAATACT TTGAGAAAGC CGTCGCCGCC GGTGATGAAC ACGCAAAAGA TAACTTAGGC
CATATGCTGG CCTCAGGCCA AGGCGGCCCT AAGGATCTCG TCCGCGCCGA AGCCTTACTC
AGCGAATATG CTGCAGAAAA TGATTTTCGC CAGTATTACC TAGGCAAACG TTTCCTCTAT
GGTGAAGATT TTGCCGTCGA CTACGGCAAA GCCCGCCACT GGTTAGAAAA ATCCTGCGCC
ACTGACAATG TCTTTGCCAA GTTAGCGCTG GCACACCTTA AGCTACTCGA CCCACAAACG
GATGATGACT ACCAGCAGGC AAGAACAGAA TTCGAGACGC TGGCGTCCCA GTGGCAAGAG
GAAGCCCTAT TCGGTCTAGG TAAAATCTAC GAGGAAGGCT TAGGCGTCTC GCGCCAACCG
ATTAAAGCCT TAATGTATTA CCAACTGGCG GCCATGAGCC ATATCAGTGA CTATCAAGAC
GCATACGAGA AGCTCAGTAA GCGCTTGGGC ACCTTAGAGA TCCGCGAAGC CCAGAGTCTG
TGTAATAACT TTCTGCATCA ACACCCTATT CCCGATGAGC AGCAAACTTA TTACTACCTT
AACCAAGCAG AAATCTACCG CAAGGGTGAG CATCCGAGCC GCGAAGCGCT GCAAACCGCA
GAGACTTGGT ACCGCAAAGC CGCCGACTTG GGCAGCCAAG ATGGCATGCA AGCCCTCGTT
GACATCAACC GCCATGAGTC GATTGATAAA CCGGTTCAGA CATACATTTG GTCTAGCATA
TTACTGCGCA ACTTTGGTCA ATACGGGATG AATAGCGATC AACTCTTGTA TCAACAACAG
GCCCTTTCCC GCTTAACGGA GTCCGAGCTG TTGTATGCCC AAGATGAAAT CGAGAGGATT
GAAACTCAGC TAGCGCCTTA CTTACAGAGC AACGAATAA
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| Protein sequence | MSLILIIIAF VVLFILFAKY QKKKIQAEAL ATGEPSALLN HGLTLINQGE VNSGLDYIQQ
AVDKGFAVAA IAMAELYSGR FPQVPADPKA SEYWYRKAAE IDPQYLPMLT LTSLVASEAQ
TPEQLREQVE QLKASAEVGQ VEFQYELAYL YLRQAFLDPD ASQAIYWFEK AAAQGNQDAY
YHLGTLYWHD ERVTPDYSKA REYFEKAVAA GDEHAKDNLG HMLASGQGGP KDLVRAEALL
SEYAAENDFR QYYLGKRFLY GEDFAVDYGK ARHWLEKSCA TDNVFAKLAL AHLKLLDPQT
DDDYQQARTE FETLASQWQE EALFGLGKIY EEGLGVSRQP IKALMYYQLA AMSHISDYQD
AYEKLSKRLG TLEIREAQSL CNNFLHQHPI PDEQQTYYYL NQAEIYRKGE HPSREALQTA
ETWYRKAADL GSQDGMQALV DINRHESIDK PVQTYIWSSI LLRNFGQYGM NSDQLLYQQQ
ALSRLTESEL LYAQDEIERI ETQLAPYLQS NE
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