| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_3682 |
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| Symbol | |
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| ID | 4476281 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 4420664 |
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| End bp | 4421839 |
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| Gene Length | 1176 bp |
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| Protein Length | 391 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 639728287 |
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| Product | ornithine decarboxylase |
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| Protein accession | YP_871307 |
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| Protein GI | 117922115 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00110632 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCAAT TTCAATCTAT TGATGTTGCT GACTATTATG ATGCTCAAAC CTTCAAACGT
ATCGAAGAGT TTGCTAAAGA TAAAGCGACC CCGTTCGTGG TGATTGATAC CAGTATCATT
GCGAAACAAT ACGATGACAT GGTTAATAGT TTTCCTTATG CCGATGTTTA TTATGCAGTT
AAGGCAAACC CTGCGGCTGA GATCCTGACG TTATTAAAAA ACAAAGGGTC AAACTTCGAT
ATTGCGTCGA TTTATGAATT AGATATGGTC ACTAACGTGG GCGTAACGCC TGACCGTGTG
AGCTATGGCA ATACCATCAA AAAGCGTCAA GATGTGCGTG CGTTTTATGA GCGTGGTGTG
CGTATGTATG CATCGGATTC TGAAGCCGAC TTACGCATGA TCGCCGAAGA AGCACCGGGT
TCACGCATCT ATGTGCGCAT CCTGACCGAA GGCACAGACA CCGCTGACTG GCCACTGTCT
CGTAAGTTTG GTTGCCAAAA TGAGATGGCT TATGAGCTGT TAGTTCTGGC GAATGAATTA
GGCTTAGAGC CCTTTGGTAT TTCATTCCAC GTGGGTTCAC AGCAACGTGA TATCGGTGCT
TGGGATTCGG CGATTGGTAA AGTGAAGAGC ATTTTCGATC GTCTGCGCGA TGAGCACAAT
ATCGTCCTGA AGATGATCAA TATGGGTGGC GGTTTCCCTG CTAACTATAT CGACAAAACC
AATCAACTCG GTGTGTATGC TGAACAAATC ACCCACTTCC TGAAGGAAGA TTTTGGTGAC
GATTTGCCAC AGATCATTCT GGAGCCGGGT CGCTCGCTGA TCTCTAACGC TGGGGTATTG
GTGTCTGAGG TGGTGCTGAT CAGTAAGAAA TCCTACACCG CATTAGAGCG TTGGGTATTT
ACCGATGTGG GTAAGTTCTC TGGTTTAATC GAAACCATGG ATGAAGCAAT CAAATTCCCA
ATCTTCACCC ATAAACAAGG TGAGTTGGAT AAATGTGTTA TCGCCGGCCC GACCTGCGAT
AGCGCCGACA TCATGTACGA ACACTACAGC TATGGTCTGC CGAATGACCT AGCGATTGGA
GACCGTATGT ACTGGTTAAC CGCCGGTGCT TACACCACGA CTTATTCAGC GGTGTGCTTT
AACGGTTTCC CACCTCTGAA GGATTACTAC CTGTAA
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| Protein sequence | MSQFQSIDVA DYYDAQTFKR IEEFAKDKAT PFVVIDTSII AKQYDDMVNS FPYADVYYAV
KANPAAEILT LLKNKGSNFD IASIYELDMV TNVGVTPDRV SYGNTIKKRQ DVRAFYERGV
RMYASDSEAD LRMIAEEAPG SRIYVRILTE GTDTADWPLS RKFGCQNEMA YELLVLANEL
GLEPFGISFH VGSQQRDIGA WDSAIGKVKS IFDRLRDEHN IVLKMINMGG GFPANYIDKT
NQLGVYAEQI THFLKEDFGD DLPQIILEPG RSLISNAGVL VSEVVLISKK SYTALERWVF
TDVGKFSGLI ETMDEAIKFP IFTHKQGELD KCVIAGPTCD SADIMYEHYS YGLPNDLAIG
DRMYWLTAGA YTTTYSAVCF NGFPPLKDYY L
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