| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_3665 |
|---|
| Symbol | |
|---|
| ID | 4476264 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. ANA-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008577 |
|---|
| Strand | - |
|---|
| Start bp | 4402121 |
|---|
| End bp | 4402771 |
|---|
| Gene Length | 651 bp |
|---|
| Protein Length | 216 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 639728270 |
|---|
| Product | MSHA biogenesis protein MshJ |
|---|
| Protein accession | YP_871290 |
|---|
| Protein GI | 117922098 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 46 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGCCC GATTTGAACA GTTAGCGCAA AAGTTTGATG TTCTCAGCCA GCGTGAGCGC
GGGCTTATCG CTCTCGCCGT ATTAGTGCTG GTCGCCATGT CGGCCTATAT GCCTATCGAG
TCGCTGTGGA AACAACAGCA TTCGACGGCG CAGCAAGTGA AGGCGTTAGA GCAAGAAAAC
AAGATTTCGA TGCAACAGAT TGATTTATAT CAGCAGCGAT TAGCTATGGA TCCTAATCAG
GACTATCGCC AGCGTTTAAA CTTGTTGCAG CAACAGAATC AAGAGATTGA TGCTCAGCTC
AATGAGCAGA TGGTGGACAT GGTGCCCGCC GATTATATGC CTGAGCTATT AGGTAACCTG
CTTGGGCAAG TTCAAGGCAT TAAATTACTT AAGTTTACCT CGGTTACGCC CGTGCCACTC
CTTGCCGTGG GTGAAGAGAA AAAGCTGAAT CTCTACAGCC ATGGAATACG CATGAGCTTG
GAGGGGGATT ATTTTTCTGT GCTGCGCTTT GTTGAAGCGG TAGAGGCTAT GCCCGACAAA
CTTTACTGGA AACGACTCGA CTATAAAGTT GCCGAATACC CTAAGGGGAA AATCGATATT
GAGCTTTATA CCTTGAGTAT CAATAAGGAC TTTATCAGTG TCGCTAAATA A
|
|---|
| Protein sequence | MKARFEQLAQ KFDVLSQRER GLIALAVLVL VAMSAYMPIE SLWKQQHSTA QQVKALEQEN
KISMQQIDLY QQRLAMDPNQ DYRQRLNLLQ QQNQEIDAQL NEQMVDMVPA DYMPELLGNL
LGQVQGIKLL KFTSVTPVPL LAVGEEKKLN LYSHGIRMSL EGDYFSVLRF VEAVEAMPDK
LYWKRLDYKV AEYPKGKIDI ELYTLSINKD FISVAK
|
|---|
| |