| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_3663 |
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| Symbol | |
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| ID | 4476262 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 4400117 |
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| End bp | 4401802 |
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| Gene Length | 1686 bp |
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| Protein Length | 561 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 639728268 |
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| Product | pilus (MSHA type) biogenesis protein MshL |
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| Protein accession | YP_871288 |
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| Protein GI | 117922096 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1450] Type II secretory pathway, component PulD |
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| TIGRFAM ID | [TIGR02519] pilus (MSHA type) biogenesis protein MshL |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGCCA TTAAATATAT TACGCCTCTA CTCTCACTTT GCCTTATGGC CTGCCAAACC
ACGGATAGAC CGCAGCCCGT TGCCTCAAAA GAAGCGCTGG CCACCTCAAT GCAAACCGCG
AGTCAGCCAA CGCCTCCACC ACCGGCCACT ATGCCCGATG CGGTGCAGCG TGAGCTGAAC
GCCAATGCCA TGATGGGTGG GTTAACTCCG CCAATGGAAA CGGAGCGTCG TATCGATGTG
TCTGCCCATG ATGTGGATGC GAGGGTGTTT TTCCCAAGTC TTGTGCAAGG CACTCCCTTT
AGCGTGGCTG TGCACCCCGA TGTGCAGGGC ACGATTTCAT TGTCACTTAA AGGTGTGACA
CTGAGTGAAG CCATTCAAGT GGTGGAAGAT ATTTATGGTT ATGAGGTGAG CCGTGAAGGG
CGCATCCTGC GCGTGTTCCC TGCGGGCATG CGAACTGAGA CTTTCCCTTT AAATTACTTA
TACATGGAGC GTGATGGTCT ATCGCTGACC TCTGTGAGTT CTGGCCGGAT TTCCGACAAT
AACAACTCGA ATAACAATAA CTCCAATAAC AACAATTCGA ACAACGGCAA TTTTGGCAAT
AACAGCAACA ATAACAATTC CAACAACGGT AATTACGGCA ACAATAACAA CAGCGATAGC
ACTAACGGCA CCTTTATTCG CTCGCGCACT AAGACCGATT TTTGGGGCGA ATTGAAAGAA
ACCTTGAGCG CCATTATTGG TGACACTGGC GGTGGTCGTC AGGTGGTGGT GACGCCACAG
GCGGGATTAG TGACGATTCG TGCCTATCCT AATGAGTTAC GTCAGGTGCG TGCCTTTTTA
AATTCCGCCG AGAGCCATCT GCAACGCCAA GTGATCCTCG AAGCGAAGAT CCTCGAAGTC
ACTTTGTCTG ACGGTTATCA GCAAGGTATT CAGTGGGATA ACGTATTGGG CCATGTAGGT
AATACCAATA TTAATTTTGG TACCTCTGCG GGCGCAGGCT TGAGCGATAA AATCACCGCT
TCCCTCGGTG GCGTGACGTC CTTAAGTATT AAAGGCTCAG ATTTCAATAC CATGATTAGC
CTGCTCGACA CCCAAGGCGA TGTGGACGTG TTGTCCAGCC CAAGGGTGAC GGCATCGAAC
AACCAAAAGG CGGTGATTAA GGTCGGTACC GACGAGTACT TTGTGACTGA CGTGTCATCG
ACCACAGTGG CGGGCACCAC GCCAGTGACC ACGCCTCAGG TAGAGTTAAC GCCGTTTTTC
TCGGGCATCG CATTGGATGT GACGCCACAA ATCGACAAAG ACGGCAATGT GCTGCTCCAT
GTGCATCCTT CCGTTATCGA TGTTAAAGAA CAAACTAAGG ACATTAAGGT CAGCAGTGAA
TCCTTAGAGC TGCCGCTGGC GCAGAGCGAG ATCCGCGAAT CCGATACCGT TATCCGCGCG
GCTTCTGGCG ATGTGGTGGT GATCGGTGGT TTGATGAAGA GCGAAAATAC TGAAGTGGTT
TCTCAAGTGC CACTGCTCGG TGATATTCCG CTCGTGGGCG AATTATTTAA AAACCGCAGC
AAGCAGAAGA AGAAAACCGA GCTGATTATT ATGTTAAAAC CGACCGTTGT GGGCGGGGAT
ACTTGGAGAA ACGAGTTAGA GCGTTCTAAG ACCTTACTCG ACCGTTGGTA TCCAGAAAAT
AAGTAA
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| Protein sequence | MTAIKYITPL LSLCLMACQT TDRPQPVASK EALATSMQTA SQPTPPPPAT MPDAVQRELN
ANAMMGGLTP PMETERRIDV SAHDVDARVF FPSLVQGTPF SVAVHPDVQG TISLSLKGVT
LSEAIQVVED IYGYEVSREG RILRVFPAGM RTETFPLNYL YMERDGLSLT SVSSGRISDN
NNSNNNNSNN NNSNNGNFGN NSNNNNSNNG NYGNNNNSDS TNGTFIRSRT KTDFWGELKE
TLSAIIGDTG GGRQVVVTPQ AGLVTIRAYP NELRQVRAFL NSAESHLQRQ VILEAKILEV
TLSDGYQQGI QWDNVLGHVG NTNINFGTSA GAGLSDKITA SLGGVTSLSI KGSDFNTMIS
LLDTQGDVDV LSSPRVTASN NQKAVIKVGT DEYFVTDVSS TTVAGTTPVT TPQVELTPFF
SGIALDVTPQ IDKDGNVLLH VHPSVIDVKE QTKDIKVSSE SLELPLAQSE IRESDTVIRA
ASGDVVVIGG LMKSENTEVV SQVPLLGDIP LVGELFKNRS KQKKKTELII MLKPTVVGGD
TWRNELERSK TLLDRWYPEN K
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