Gene Shewana3_3655 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3655 
Symbol 
ID4476254 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp4391111 
End bp4392724 
Gene Length1614 bp 
Protein Length537 aa 
Translation table11 
GC content54% 
IMG OID639728260 
ProductIS4 family transposase 
Protein accessionYP_871280 
Protein GI117922088 
COG category[L] Replication, recombination and repair 
COG ID[COG5421] Transposase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.338356 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGCTC CCGCTATCTC TATCCGTAAC CTCGACCACC TTGGTTTGGT CGCTGCACTT 
TGCCAAGAAC TCGGCATTGC TCGCATGATT GATGCGGTGC TACCCAAAAC GCCGCCCTAC
AAAGTCTCAC ATGGTGAAGC GTTGGTGGCG ATGATACTGA ACGGTCTTGG CTTTCATAGT
TCGACCTTGC ACATGTTCCC GCAATTCTTT GCCAACAAGC CTGTAGAACG CCTGATTGGC
CCGGGGATCT GTGCCGATGA CCTCAATGAT GATGTGCTCG GCCGCTGCCT TGATGCCCTC
TTTGAGGCCG ATGTCAGCAC GCTTTATCAG GTGATGGCGG AGCAGGTCGT TGAACGATTG
GGGCTCAAAA GTACTGCAGT ACACCTCGAT ATCACCAGCT TCCACGTCGA TGGCGCCTAT
GACCAAGCCG ATGGCGAGCA GCTCGGTAAG TTGCAATTGG TACGGGGCTA TAGCCGCGAC
CATCGGCCAG AGCTAAACCA GGTTATCCTG GAGCTTATCT GTGAAAATCA GGCCGGCCTG
CCCATCTACA TGCAAGCCTT GAGTGGTAAT ATTAATGATA CCAAGGCCTT TGCCCAGACG
GTACGGCGCC ACTTGAGCAG TCTCAAGGCC GCGCAGGAGA GTCGTTATCT GGTCGGCGAT
GCGGCGCTGT ATTGCGCCGA CACCTTGCAA CTACTGGCAC AACAGCAACA GTTGTTCGTG
ACTCGTGTGC CTGTCACCCT CAATGAAGCC AAGCGAGCCG TGGCAACCAT TGGCACCCAG
TCGCTGGTTG CGCTGGGCAA TGGCTATCAT GGCTGTTGGC AAAGCGCCAA TTATGCCGAC
GTCGCGCAGC GTTGGTTGCT GGTGCGCAGC GAACAGGCCA GCCACCGTGA GCAGCAAACA
TTAGCCAAAA ACCTACTGAA AGACAGCACG CGTGAACTGA AAGCCTTCAA CAAATTATGT
GCCCAGCGTT TTGCCTGCGA GACCGATGCG CAGGCTGAAT TAGCCCGTTT TGCTGTCAGC
TTAAATCTGC TGCAACTAGA AGCAGAAGTC GTGAGTGAAC CTATCTATGC AGGGCGCGGA
AGGCCCCAAA AGGGTGAAAT GCCGGTGAAC TACCAATTTC ACATCAAGGG GTTAGCCGCA
AGTAGCTTGG CGCGGGTGGC TGAGGCGCGC AACCAGACAG GGGTGTTCAT CCTCGCGACC
AATGATCACA GTGAAACGCT CACCATGGCT GAGCTGTTGG CTACCTATAA AGCCCAGCAG
AATGTCGAGC GTGGTTTTAG GTTTCTGAAA AGTCCCGAAT TTTTAACCTC CTCGTTATAT
CTTAAAAAAC CGGAACGTAT CGAAGCGTTG CTGATGGTGA TGACCTGTAG CCTGATGATT
TATGCGGCGC TGGAGCACCG GATCCGGCAG GGCTTAGTAG AGCAGAACCG GAGTGTGGCG
GACATGAAAA AGAAACCCAC GCAAAAACCG ACTGCGCGGT GGATTTTTTT ACGCTTTGGC
GGGGTGCACG AGTACCAGTT GGGAGAGGCG CCACCTCAAG TCACAGGACT CACAGTGGAC
CAGCAGATCA TTCTCGACGT GTTAGGCGAA CGGTATCGGC AAATTTATTC CTAA
 
Protein sequence
MAAPAISIRN LDHLGLVAAL CQELGIARMI DAVLPKTPPY KVSHGEALVA MILNGLGFHS 
STLHMFPQFF ANKPVERLIG PGICADDLND DVLGRCLDAL FEADVSTLYQ VMAEQVVERL
GLKSTAVHLD ITSFHVDGAY DQADGEQLGK LQLVRGYSRD HRPELNQVIL ELICENQAGL
PIYMQALSGN INDTKAFAQT VRRHLSSLKA AQESRYLVGD AALYCADTLQ LLAQQQQLFV
TRVPVTLNEA KRAVATIGTQ SLVALGNGYH GCWQSANYAD VAQRWLLVRS EQASHREQQT
LAKNLLKDST RELKAFNKLC AQRFACETDA QAELARFAVS LNLLQLEAEV VSEPIYAGRG
RPQKGEMPVN YQFHIKGLAA SSLARVAEAR NQTGVFILAT NDHSETLTMA ELLATYKAQQ
NVERGFRFLK SPEFLTSSLY LKKPERIEAL LMVMTCSLMI YAALEHRIRQ GLVEQNRSVA
DMKKKPTQKP TARWIFLRFG GVHEYQLGEA PPQVTGLTVD QQIILDVLGE RYRQIYS