Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_3644 |
Symbol | |
ID | 4476243 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 4379247 |
End bp | 4380755 |
Gene Length | 1509 bp |
Protein Length | 502 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 639728250 |
Product | ribonuclease G |
Protein accession | YP_871270 |
Protein GI | 117922078 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1530] Ribonucleases G and E |
TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAATACCG GTCGCTTAAA TCCGAATAAA GTTCAGCGCA AGATGGGTTC AGAATTACTG ATTAACGTAA CCCCATCTGA GGCACGTGTG GCTCTGGTTG AGCATGGCGT GCTGCAAGAA GTCCATATCG AGAGGCGCAT GAAGCGCGGT CTGGTGGGCA ATATTTACAA GGGCAAAATC AGCCGTGTGT TGCCCGGCAT GCAAGCCGCT TTTGTGGATA TTGGCTTAGA TAAAGCCGCG TTTTTACATG CCTCCGACAT AGTGCCGCAC ACCGAATGCG TGGCCGATGT GGAAAAAGGC CATTTTGTGG TCCGTGATAT CGCCGAGTTG GTTCGCCAAG GGCAAGATAT TATGGTGCAG GTGGTAAAAG ATCCGCTCGG CACTAAAGGT GCGCGCCTAA CCACAGATAT CACTCTGCCT TCCCGTTATC TGGTGTTTAT GCCAGGCTCA AGCCATGTTG GGGTATCTCA GCGGATTGAG CAGGAAGAAG AGCGCAGTCG CCTTAAGAAA ATCACTCTGC CTTTCGTCGA TGAAGACGGC GGCTTTATTA TTCGCACCGC CGCCGAAGGC GTGGGTGAAG ATGAGCTTGC TCAGGATGCG GCCTTCCTGC GTCGGGTGTG GTCTAAGGTC TCCGAGCGGC GTCAGCGCCG TGGCGTGGCA CTCTTGTATC AAGACCTCGC CCTGCCAGTG CGCATTGTGC GCGACTTTGT CGGAACCGAA TTAGATAGAA TTCAAGTCGA TTCGCGCCGC ACCTTTGCCG AGCTGCAAGC CTTCGCCCAA GAGTTTATGC CGGAAATCGC CGACAAGATT GAGCACTATT CCGGTCCTGC ACCGATTTTC GATCTCTACG ATGTGGAGAA TGAAATCCAG CGCGCCCTGG GTCGCAAGGT CGAACTCAAA TCGGGTGGCT ATCTGATTAT CGATCAGACC GAGGCTATGA CCACGGTCGA TATCAACACC GGTGCTTTTG TTGGCCACCG TAATCTTGAA GAAACCATCT TCAACACTAA CCTCGAAGCT ACCCAAGCGA TTGCGCGGCA ATTGCGGCTA CGTAATCTCG GCGGCATCAT CATTATCGAC TTTATCGATA TGCTGAGCGA CGAGCATAAA ACGCGGGTGC TCAATAGCTT AAATAGCGCG CTCGCCAAGG ACAGAGTCAA GACGAATGTC AGTGGCTTCT CAGGTCTTGG CTTGGTTGAA ATGACCCGTA AGCGCACCCG CGAAAGCTTG GAGCACGTGC TGTGCGGCGA ATGCCCTGCC TGTCAGAGTA CGGGCAGCAT GAAGACGGTT GAAACGGTTT CCTACGAAAT CTTCCGTGAA ATCATTCGCT TGAATCGAGC CTATGATGCC GATGAGTTTT TGCTTTACTG CTCGCCCGCT GTGTATAACA GTCTAAGTGG CGATGAAAGT CATCTGGTCG CCGAGCTTGA GGTCTACATA GGTAAACGCA TTCGCCTGCA AAATGAGCCC ATGTATTCCC AGCACAAATA CGACGTGGTG ATGATGTAG
|
Protein sequence | MNTGRLNPNK VQRKMGSELL INVTPSEARV ALVEHGVLQE VHIERRMKRG LVGNIYKGKI SRVLPGMQAA FVDIGLDKAA FLHASDIVPH TECVADVEKG HFVVRDIAEL VRQGQDIMVQ VVKDPLGTKG ARLTTDITLP SRYLVFMPGS SHVGVSQRIE QEEERSRLKK ITLPFVDEDG GFIIRTAAEG VGEDELAQDA AFLRRVWSKV SERRQRRGVA LLYQDLALPV RIVRDFVGTE LDRIQVDSRR TFAELQAFAQ EFMPEIADKI EHYSGPAPIF DLYDVENEIQ RALGRKVELK SGGYLIIDQT EAMTTVDINT GAFVGHRNLE ETIFNTNLEA TQAIARQLRL RNLGGIIIID FIDMLSDEHK TRVLNSLNSA LAKDRVKTNV SGFSGLGLVE MTRKRTRESL EHVLCGECPA CQSTGSMKTV ETVSYEIFRE IIRLNRAYDA DEFLLYCSPA VYNSLSGDES HLVAELEVYI GKRIRLQNEP MYSQHKYDVV MM
|
| |