Gene Shewana3_3644 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3644 
Symbol 
ID4476243 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp4379247 
End bp4380755 
Gene Length1509 bp 
Protein Length502 aa 
Translation table11 
GC content52% 
IMG OID639728250 
Productribonuclease G 
Protein accessionYP_871270 
Protein GI117922078 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1530] Ribonucleases G and E 
TIGRFAM ID[TIGR00757] ribonuclease, Rne/Rng family 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATACCG GTCGCTTAAA TCCGAATAAA GTTCAGCGCA AGATGGGTTC AGAATTACTG 
ATTAACGTAA CCCCATCTGA GGCACGTGTG GCTCTGGTTG AGCATGGCGT GCTGCAAGAA
GTCCATATCG AGAGGCGCAT GAAGCGCGGT CTGGTGGGCA ATATTTACAA GGGCAAAATC
AGCCGTGTGT TGCCCGGCAT GCAAGCCGCT TTTGTGGATA TTGGCTTAGA TAAAGCCGCG
TTTTTACATG CCTCCGACAT AGTGCCGCAC ACCGAATGCG TGGCCGATGT GGAAAAAGGC
CATTTTGTGG TCCGTGATAT CGCCGAGTTG GTTCGCCAAG GGCAAGATAT TATGGTGCAG
GTGGTAAAAG ATCCGCTCGG CACTAAAGGT GCGCGCCTAA CCACAGATAT CACTCTGCCT
TCCCGTTATC TGGTGTTTAT GCCAGGCTCA AGCCATGTTG GGGTATCTCA GCGGATTGAG
CAGGAAGAAG AGCGCAGTCG CCTTAAGAAA ATCACTCTGC CTTTCGTCGA TGAAGACGGC
GGCTTTATTA TTCGCACCGC CGCCGAAGGC GTGGGTGAAG ATGAGCTTGC TCAGGATGCG
GCCTTCCTGC GTCGGGTGTG GTCTAAGGTC TCCGAGCGGC GTCAGCGCCG TGGCGTGGCA
CTCTTGTATC AAGACCTCGC CCTGCCAGTG CGCATTGTGC GCGACTTTGT CGGAACCGAA
TTAGATAGAA TTCAAGTCGA TTCGCGCCGC ACCTTTGCCG AGCTGCAAGC CTTCGCCCAA
GAGTTTATGC CGGAAATCGC CGACAAGATT GAGCACTATT CCGGTCCTGC ACCGATTTTC
GATCTCTACG ATGTGGAGAA TGAAATCCAG CGCGCCCTGG GTCGCAAGGT CGAACTCAAA
TCGGGTGGCT ATCTGATTAT CGATCAGACC GAGGCTATGA CCACGGTCGA TATCAACACC
GGTGCTTTTG TTGGCCACCG TAATCTTGAA GAAACCATCT TCAACACTAA CCTCGAAGCT
ACCCAAGCGA TTGCGCGGCA ATTGCGGCTA CGTAATCTCG GCGGCATCAT CATTATCGAC
TTTATCGATA TGCTGAGCGA CGAGCATAAA ACGCGGGTGC TCAATAGCTT AAATAGCGCG
CTCGCCAAGG ACAGAGTCAA GACGAATGTC AGTGGCTTCT CAGGTCTTGG CTTGGTTGAA
ATGACCCGTA AGCGCACCCG CGAAAGCTTG GAGCACGTGC TGTGCGGCGA ATGCCCTGCC
TGTCAGAGTA CGGGCAGCAT GAAGACGGTT GAAACGGTTT CCTACGAAAT CTTCCGTGAA
ATCATTCGCT TGAATCGAGC CTATGATGCC GATGAGTTTT TGCTTTACTG CTCGCCCGCT
GTGTATAACA GTCTAAGTGG CGATGAAAGT CATCTGGTCG CCGAGCTTGA GGTCTACATA
GGTAAACGCA TTCGCCTGCA AAATGAGCCC ATGTATTCCC AGCACAAATA CGACGTGGTG
ATGATGTAG
 
Protein sequence
MNTGRLNPNK VQRKMGSELL INVTPSEARV ALVEHGVLQE VHIERRMKRG LVGNIYKGKI 
SRVLPGMQAA FVDIGLDKAA FLHASDIVPH TECVADVEKG HFVVRDIAEL VRQGQDIMVQ
VVKDPLGTKG ARLTTDITLP SRYLVFMPGS SHVGVSQRIE QEEERSRLKK ITLPFVDEDG
GFIIRTAAEG VGEDELAQDA AFLRRVWSKV SERRQRRGVA LLYQDLALPV RIVRDFVGTE
LDRIQVDSRR TFAELQAFAQ EFMPEIADKI EHYSGPAPIF DLYDVENEIQ RALGRKVELK
SGGYLIIDQT EAMTTVDINT GAFVGHRNLE ETIFNTNLEA TQAIARQLRL RNLGGIIIID
FIDMLSDEHK TRVLNSLNSA LAKDRVKTNV SGFSGLGLVE MTRKRTRESL EHVLCGECPA
CQSTGSMKTV ETVSYEIFRE IIRLNRAYDA DEFLLYCSPA VYNSLSGDES HLVAELEVYI
GKRIRLQNEP MYSQHKYDVV MM