Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_3615 |
Symbol | |
ID | 4476215 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 4342192 |
End bp | 4342506 |
Gene Length | 315 bp |
Protein Length | 104 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 639728223 |
Product | transcriptional repressor protein MetJ |
Protein accession | YP_871243 |
Protein GI | 117922051 |
COG category | [E] Amino acid transport and metabolism [K] Transcription |
COG ID | [COG3060] Transcriptional regulator of met regulon |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.902185 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGAAT GGAATGGGGA ATACATCAGC CCCTATGCTG AACATGGCAA GAAGAATGAA CAAGTAAAGA AAATTACTGT GTCTATTCCG CTCAAAGTGC TAAAAGTCCT CACGGATGAA CGTACCCGTC GTCAGGTGAA CAACCTGCGC CACGCCACCA ATAGCGAACT CTTGTGTGAA GCATTTTTGC ATGCCTACAC CGGCCAGCCT CTGCCTAATG ATGCCGATCT GTCGAAAGAT AGCCCAGACA GCATTCCCGC CGAAGCGAAA CGGTTGATGG ACGAAATGGG GATCGAGTGG GAAGATATGG AATAA
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Protein sequence | MTEWNGEYIS PYAEHGKKNE QVKKITVSIP LKVLKVLTDE RTRRQVNNLR HATNSELLCE AFLHAYTGQP LPNDADLSKD SPDSIPAEAK RLMDEMGIEW EDME
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