| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_3612 |
|---|
| Symbol | metF |
|---|
| ID | 4476212 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. ANA-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008577 |
|---|
| Strand | - |
|---|
| Start bp | 4337205 |
|---|
| End bp | 4338098 |
|---|
| Gene Length | 894 bp |
|---|
| Protein Length | 297 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 639728220 |
|---|
| Product | 5,10-methylenetetrahydrofolate reductase |
|---|
| Protein accession | YP_871240 |
|---|
| Protein GI | 117922048 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0685] 5,10-methylenetetrahydrofolate reductase |
|---|
| TIGRFAM ID | [TIGR00676] 5,10-methylenetetrahydrofolate reductase, prokaryotic form |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTTTTC ATCACGCACA ACATTCACAT TCGCTAAACC AAAGTTTGTC TGAACTTAAT
GGCGATATTA ATGTTTCTTT TGAGTTTTTC CCGCCATCAA CCCCCGAAAT GGAACAGATC
CTGTGGAACT CTATCCGCCG TTTAGAGCCG CTGAATCCTA AGTTTGTTTC AGTGACCTAT
GGTGCAAACT CGGGCGTGCG TGACCGCACC CACGGCGTGA TTGAACGTAT TCAAAAAGAA
ACCAATCTGG TTGCCGCGCC GCATTTAACC TTAGTGGATG CCAGCGATGA AGAGCTGTTA
GATCTGGCGA AGCATTACTG GAAATCGGGG ATCCGCGACA TAGTGGCACT GCGTGGCGAT
TTGCCTGCGG GCAGCCCAAA ACCGACTCGC TTTGCGGCGG ATTTAGTGCG CCTGCTGCGC
TCAGTGGCCG ACTTTGATAT TTCGGTCGCC GCTTACCCAG AAGTGCACCC AGATGCGGCT
AACGCTCAAG CCGATTTGAT TAACCTTAAG CGTAAAATCG ATGCCGGTGC GAGCCGTGCT
ATTACCCAGT TTTTCTTCGA TGTTGAGTCT TACTTACGCT TTCGCGACCG CTGCGTTGCG
GCGGGAATTG ATGTCGAAAT CGTCCCCGGT ATTTTACCCG TGACTAACTT CACTCAGCTA
AAACGTTTCG CGGGCATGAC CAATGTGAGC TTGCCGAGCT GGTTGCATAA GCAGTTCGAT
GGCTTAGAGA ATGATGCGGG AACCCGTCAG CTGGTGGGCG CTAACGTGGC GATCGATATG
GTCAAAGTGC TATCCCGTGA AGGTGTTAAA GATTTCCACT TCTACACCCT CAACCGCGCC
GAACTGACCT ATGCGATTTG CCATACCTTA GGGGTTCGCC CAAAGGCGGT ATAA
|
|---|
| Protein sequence | MAFHHAQHSH SLNQSLSELN GDINVSFEFF PPSTPEMEQI LWNSIRRLEP LNPKFVSVTY
GANSGVRDRT HGVIERIQKE TNLVAAPHLT LVDASDEELL DLAKHYWKSG IRDIVALRGD
LPAGSPKPTR FAADLVRLLR SVADFDISVA AYPEVHPDAA NAQADLINLK RKIDAGASRA
ITQFFFDVES YLRFRDRCVA AGIDVEIVPG ILPVTNFTQL KRFAGMTNVS LPSWLHKQFD
GLENDAGTRQ LVGANVAIDM VKVLSREGVK DFHFYTLNRA ELTYAICHTL GVRPKAV
|
|---|
| |