Gene Shewana3_3606 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3606 
Symbol 
ID4476206 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp4330531 
End bp4331589 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content51% 
IMG OID639728214 
Productcytochrome c family protein 
Protein accessionYP_871234 
Protein GI117922042 
COG category[C] Energy production and conversion 
COG ID[COG3258] Cytochrome c 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0522212 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATCTT CTGCCATCTT ACTATTGGCC GCAATGGGCG TGCTAACAGC TCAAGTGCAG 
GCTGCGAATG AGTTACCCGA CAAACAAGCG CCATTGCCCT CAGTCCCTAA AAACCCTGAT
CAAACCTATC TTACGCCTAG ACCCTTAAGT GCGATTCCCG AAGGGGCCTT CGGCGATAAA
GTACGCTTGG GTTTTCAGTT ATTTGTGAAT ACCCAGCAGT TAAGAGATAA GTATGTGGGT
AACGAGCTTA ACTGTGCCAA CTGCCATATG GATGCGGGCC GTAAGGCGAA TGCGTCACCG
CTTTGGGGCG CCTATTTTGC GTATCCCGCG TATCGTAAAA AAGACGATAA AGTAAATACC
TTTCAAGAAA GGGTACAAGG CTGTTTTAAC TATTCGATGA ATGGTAAAGC CCCCGCAGCG
GGCAGCCCCG AACTGGTCGC GCTATCTGCC TATGCCTACT GGTTAGGGAT GAGTGGCCTA
ATGGATGCGG CTAACCTTGA TGGTACAGTG CCAGAACTTA GCGATGCCGA ATTGGTAAAA
GGCGCCAAAC GTGAGGATTT CCCACTGCCA GACACACTAG CCAAAGCCAT GACTGTGGAG
CAACGCGCAA ATCTGCCTGG CCGTGGTTAT CCTGAGATCC CAAAACCTGA GCTCGCGTTC
TCACCCGAGC GCGGCAAAGC CGTGTATATC GCCCACTGCC AAGCGTGCCA TGGCGCCGAT
GGTCAAGGCC AATCGATTGC CGGTGTTTAC TCTCTGCCAC CACTGTGGGG GCCAATGAGC
TACAACTGGG GCGCTGGTAT GCACAGGGTC AATACAGCCG CATTCTTCAT TTATGAAAAC
ATGCCTTTCG CTAAGAGTAT TCAGCTGACT CACCAACAGG CTTGGGACGT TGCGGCTTAC
ATTAACTCCC ATGAACGGCC ACAGGACCCC CGCAATAAGG GCGATGTGAA ACAAGCGCAG
GAGAAATACC ATAATGACAA TGACTACTAC GGTGTCGAAG TCGATGGCAA AGTGCTTGGC
ACCGCTTCTT ATCCGGTGTT TCCGAAAAGT CATAGTTGA
 
Protein sequence
MKSSAILLLA AMGVLTAQVQ AANELPDKQA PLPSVPKNPD QTYLTPRPLS AIPEGAFGDK 
VRLGFQLFVN TQQLRDKYVG NELNCANCHM DAGRKANASP LWGAYFAYPA YRKKDDKVNT
FQERVQGCFN YSMNGKAPAA GSPELVALSA YAYWLGMSGL MDAANLDGTV PELSDAELVK
GAKREDFPLP DTLAKAMTVE QRANLPGRGY PEIPKPELAF SPERGKAVYI AHCQACHGAD
GQGQSIAGVY SLPPLWGPMS YNWGAGMHRV NTAAFFIYEN MPFAKSIQLT HQQAWDVAAY
INSHERPQDP RNKGDVKQAQ EKYHNDNDYY GVEVDGKVLG TASYPVFPKS HS