Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_3602 |
Symbol | |
ID | 4476202 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 4325639 |
End bp | 4326454 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 639728210 |
Product | hydratase/decarboxylase family protein |
Protein accession | YP_871230 |
Protein GI | 117922038 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3971] 2-keto-4-pentenoate hydratase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCACAGA CAGACGCTAA AACACAGCTT GAGTCCATTA ACGCAGCAGC ACAAGAACTC GCCCAGCGAC GCGCCAAGGG TGAAGCGGAC GCCCTGTTAC AAGAAGCGCT AAGACCGAAA GATTTCCCCC ACGCCTTTGC CATCCAGCAG GCCATTGCGC AGCTGTTTAG CGCCCAAGGC AACCCAATTG CAGGGTGGAA GTGCTTACTG CCAACCGCAG AAAAAACCGT GGTAGCACCT ATCTATCAAC ATGATGTGTA TATCGAAACC GCCGAGTGTC CGCTTTATCC TTCGAGCAAA GGGCTTGCCC GTGTCGAACC CGAGCTCGCC TTTGAAATTG GCAGCGATTT ACCACCACGA TCCACGCCTT ATTCAGGAGC CGAAATTGAC GCCGCCCTCG GTAAAACGCG CCTCGCCTTG GAACTAATCA AAAGTCGTTA TCAAAACCCA AGCGAAGCCA ATCACTTCGA CGCCCTCGCC GATGGCTTAG TCAATCAAGG CCTATGGTTA GGGCCTGAAC TGCTTACACC AGCCGAGATA GAAACAGGTC ATTTCGCCCT AAGCGTTGAA ATCGCCGCAA GCGGACAGCA AGCAAGTGAA ACTCTACAAA AAGCCGCTGT TCATCCAAAT GGTTTCCCTA AAGCTGGGCT TTATTGGTTG GTCAACTTCT TATCTACCCA AGGGATTGGC TTAACCCGAG GACAATATGT GATCACAGGC TCCTATGCGG GGGTATTAGA TTTGCCACTC AATCAGCACT GCCAACTCCA CTACGGCGAC TTAGGCCAGT TTGCTTTGCA GTTCGTGGCT AAATAA
|
Protein sequence | MSQTDAKTQL ESINAAAQEL AQRRAKGEAD ALLQEALRPK DFPHAFAIQQ AIAQLFSAQG NPIAGWKCLL PTAEKTVVAP IYQHDVYIET AECPLYPSSK GLARVEPELA FEIGSDLPPR STPYSGAEID AALGKTRLAL ELIKSRYQNP SEANHFDALA DGLVNQGLWL GPELLTPAEI ETGHFALSVE IAASGQQASE TLQKAAVHPN GFPKAGLYWL VNFLSTQGIG LTRGQYVITG SYAGVLDLPL NQHCQLHYGD LGQFALQFVA K
|
| |