Gene Shewana3_3602 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3602 
Symbol 
ID4476202 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp4325639 
End bp4326454 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content52% 
IMG OID639728210 
Producthydratase/decarboxylase family protein 
Protein accessionYP_871230 
Protein GI117922038 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3971] 2-keto-4-pentenoate hydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACAGA CAGACGCTAA AACACAGCTT GAGTCCATTA ACGCAGCAGC ACAAGAACTC 
GCCCAGCGAC GCGCCAAGGG TGAAGCGGAC GCCCTGTTAC AAGAAGCGCT AAGACCGAAA
GATTTCCCCC ACGCCTTTGC CATCCAGCAG GCCATTGCGC AGCTGTTTAG CGCCCAAGGC
AACCCAATTG CAGGGTGGAA GTGCTTACTG CCAACCGCAG AAAAAACCGT GGTAGCACCT
ATCTATCAAC ATGATGTGTA TATCGAAACC GCCGAGTGTC CGCTTTATCC TTCGAGCAAA
GGGCTTGCCC GTGTCGAACC CGAGCTCGCC TTTGAAATTG GCAGCGATTT ACCACCACGA
TCCACGCCTT ATTCAGGAGC CGAAATTGAC GCCGCCCTCG GTAAAACGCG CCTCGCCTTG
GAACTAATCA AAAGTCGTTA TCAAAACCCA AGCGAAGCCA ATCACTTCGA CGCCCTCGCC
GATGGCTTAG TCAATCAAGG CCTATGGTTA GGGCCTGAAC TGCTTACACC AGCCGAGATA
GAAACAGGTC ATTTCGCCCT AAGCGTTGAA ATCGCCGCAA GCGGACAGCA AGCAAGTGAA
ACTCTACAAA AAGCCGCTGT TCATCCAAAT GGTTTCCCTA AAGCTGGGCT TTATTGGTTG
GTCAACTTCT TATCTACCCA AGGGATTGGC TTAACCCGAG GACAATATGT GATCACAGGC
TCCTATGCGG GGGTATTAGA TTTGCCACTC AATCAGCACT GCCAACTCCA CTACGGCGAC
TTAGGCCAGT TTGCTTTGCA GTTCGTGGCT AAATAA
 
Protein sequence
MSQTDAKTQL ESINAAAQEL AQRRAKGEAD ALLQEALRPK DFPHAFAIQQ AIAQLFSAQG 
NPIAGWKCLL PTAEKTVVAP IYQHDVYIET AECPLYPSSK GLARVEPELA FEIGSDLPPR
STPYSGAEID AALGKTRLAL ELIKSRYQNP SEANHFDALA DGLVNQGLWL GPELLTPAEI
ETGHFALSVE IAASGQQASE TLQKAAVHPN GFPKAGLYWL VNFLSTQGIG LTRGQYVITG
SYAGVLDLPL NQHCQLHYGD LGQFALQFVA K