Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_3595 |
Symbol | |
ID | 4476195 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 4317768 |
End bp | 4319627 |
Gene Length | 1860 bp |
Protein Length | 619 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 639728203 |
Product | DEAD/DEAH box helicase domain-containing protein |
Protein accession | YP_871223 |
Protein GI | 117922031 |
COG category | [J] Translation, ribosomal structure and biogenesis [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG0513] Superfamily II DNA and RNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCATCCA GTGAAAGAAC TTTCCGTGAA CTCGGCTTGT CCGAGAATTT GTTGCGTGCT CTTGACGAGC TAGGTTACGA AAACCCAACG CCAATCCAAT CAGCCAGTAT CGACCCATTA ATGGCTGGCA AAGATATTTT AGGTCAGGCA CAAACAGGTA CAGGTAAAAC TGGCGCCTTC GCCCTGCCCC TGCTCAACAA AGTGACCAGC CAAGCTGTCC CACAAATTTT AGTATTAGCG CCAACCCGCG AATTAGCGGT GCAAGTCGCA GAAGCTTTCA GCAGCTACGC GAAATTTATG AAAGGTTTCC ATGTACTGCC AATCTATGGC GGTCAGAGCA TGCATCAGCA ATTAAACGCC CTGAAGCGTG GCCCACAGGT TATCGTGGGT ACACCGGGCC GTGTTATGGA CCATATGCGC CGTGGCACTT TAAAGCTGGA AACCCTGCAA GCGCTGGTAC TCGACGAAGC CGACGAAATG TTAAAAATGG GCTTTATCGA CGATATCGAA TGGATTCTGG AACACACACC AGAGCAGCGC CAACTGGCAC TGTTCTCGGC CACTATGCCA GAACAAATCA AGCGTGTTGC TAACAAGCAC TTAAAAGATG CGACTAACAT CAGCATCGCT GCGAGCCACA CCACAGTTGA CTCTATCGAG CAACGTTTCG TGCAAGTGTC TCAGCACAAC AAGTTAGAAG CTTTAGTTCG CGTATTAGAA GTTGAAAATA CTGAAGGTAT CATCATCTTC GTTCGTACCC GTAACTCATG CGTTGAATTA GCAGAAAAAC TCGAAGCCCG TGGCTATGCC TCATCACCAC TGCACGGTGA TATGAACCAG CAAGCCCGTG AGCGTGCGGT TGAGCAGCTG AAAAGCGGTA AGTTAGACAT TCTGATCGCG ACCGACGTTG CGGCCCGTGG TCTGGACGTT GAGCGTATCG GCCACGTAGT GAACTACGAT ATCCCTTACG ATACTGAAGC TTACGTACAC CGTATCGGTC GTACTGGCCG GGCTGGCCGT ACTGGTATGG CGATTCTGTT CGTGACCAGC CGAGAAATGC GTATGCTGCG CACCATCGAG CGCGCAACTA ATAGCCGTAT TTCGCCAATG AAAGTGCCAA GCCCAGAGAC GGTTGCAGAA CGTCGTCTGT CTCGCTTAGG TGAGCAGTTA GCGCAAACCA TGACTCAAGA TCTGGACTTT ATGCGCGAAG CGGTTGCCCA GTTATGTCAA CAACTGGAAG TGGATACCGA TCTGCTGGCC GCAGCCCTGC TACACCAAGT TCAGCAAGAG CGTCCACTGC AGTTGCCAGC GATTCAAGAA CGTACTCGCG ATGAGCGCAG CGAACGTGGT GCTGAACGTG GCGAGCGCGG TGAACGCCGT AGCCGTGAAT CACGCCCAAT GCCAGCAAGC CTTGGTAGCG CTGAAGCGTT AAAAGACAAT CCAGATCTGA AGATGTGCCG TTATGTTATC GACGTGGGTC GTGACAATGG CGTGGGTGTG GGCAACATCG TTGGCGCTAT TGCAAACGAA GCTAACATCG ACAGCCGTTA CATTGGTGCT ATCCAGTTAT ACGACGCAGT GACTACCGTT GACCTGCCAG ACGGCATGCC AAAAGAAGTA CTGCAGCACC TGAAGAAAGT GCGCGTATGT GGCAAGCCAC TGAACATCCG TGAAGCTGGC GATCAAGTAT TTGTAGACTC TGGCCGTGGC GCACGTAGCG ACCGTCGTCC ACGTGGTGAT CGTCCGATGG GCGAGCGTAA ACCACGTTCA GCCTCTGGTG ACAAGCCGTT TGCAGACCGC AAACCACGTT CAGACAAGCC TGCAGGCGAG CGTAGACCAC GTAAACCACG CGAAGAGTAA
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Protein sequence | MSSSERTFRE LGLSENLLRA LDELGYENPT PIQSASIDPL MAGKDILGQA QTGTGKTGAF ALPLLNKVTS QAVPQILVLA PTRELAVQVA EAFSSYAKFM KGFHVLPIYG GQSMHQQLNA LKRGPQVIVG TPGRVMDHMR RGTLKLETLQ ALVLDEADEM LKMGFIDDIE WILEHTPEQR QLALFSATMP EQIKRVANKH LKDATNISIA ASHTTVDSIE QRFVQVSQHN KLEALVRVLE VENTEGIIIF VRTRNSCVEL AEKLEARGYA SSPLHGDMNQ QARERAVEQL KSGKLDILIA TDVAARGLDV ERIGHVVNYD IPYDTEAYVH RIGRTGRAGR TGMAILFVTS REMRMLRTIE RATNSRISPM KVPSPETVAE RRLSRLGEQL AQTMTQDLDF MREAVAQLCQ QLEVDTDLLA AALLHQVQQE RPLQLPAIQE RTRDERSERG AERGERGERR SRESRPMPAS LGSAEALKDN PDLKMCRYVI DVGRDNGVGV GNIVGAIANE ANIDSRYIGA IQLYDAVTTV DLPDGMPKEV LQHLKKVRVC GKPLNIREAG DQVFVDSGRG ARSDRRPRGD RPMGERKPRS ASGDKPFADR KPRSDKPAGE RRPRKPREE
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