| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_3592 |
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| Symbol | |
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| ID | 4476192 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 4313144 |
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| End bp | 4315996 |
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| Gene Length | 2853 bp |
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| Protein Length | 950 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639728200 |
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| Product | excinuclease ABC subunit A |
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| Protein accession | YP_871220 |
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| Protein GI | 117922028 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0178] Excinuclease ATPase subunit |
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| TIGRFAM ID | [TIGR00630] excinuclease ABC, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0287106 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATAAGA TTGAAATACG CGGCGCACGG ACCCACAATC TCAAAAATAT CAACCTGACT
ATCCCAAGGG ATAAGTTAAT CGTTATCACA GGGTTATCGG GTTCAGGCAA ATCTTCCCTA
GCATTTGATA CCTTATATGC CGAAGGCCAA CGACGTTATG TTGAGTCTCT TTCTGCCTAT
GCCCGCCAAT TCTTAAGCTT GATGGAAAAG CCCGATGTCG ACCATATCGA AGGCTTGAGC
CCGGCGATTT CCATCGAACA AAAATCGACA TCCCATAACC CGCGCTCTAC CGTCGGGACT
ATTACCGAAA TTTACGACTA TCTGCGTCTG TTGTTTGCCC GCGTGGGAGA ACCACGCTGC
CCAACTCACG GCCAACCACT TGCGGCGCAA ACCGTGAGTC AGATGGTCGA TAAAGTGTTA
GAAATGCCCG AAGACAGCCG CTTGATGCTG CTGGCGCCCG TAGTCAATGG TCGTAAGGGT
GAGCACGTAA AATTACTCGA AGGCTTATCG GCGCAGGGCT ATATCCGCGC CCGAATCGAC
GGTGAAGTCT GCGACTTAAC CGATCCACCA GCACTCGATT TACACGTTAA GCACACTATC
GAAGTGGTGG TCGACCGCTT TAAAGTCCGC AGCGATATCC AGCAGCGTCT CGCCGAATCC
TTTGAAACCG CGCTCGAACT CTCTGGCGGG ATTGCCGTGG TCGCCAGCAT GGATGAAGGC
ACCACAGAAG AATTAATCTT CTCAGCAAAT TTTGCCTGTC CGCACTGCGG TTATTCGATG
GCAGAGCTTG AGCCACGGAT TTTCTCCTTT AACAATCCGG CGGGCGCTTG CCCAACCTGT
GATGGTTTAG GGGTACAACA ATTTTTCGAC CCAGACAGAG TGATCACTAA CCCTGAGTTA
TCCCTTGCGG GCGGCGCGAT TCGTGGCTGG GATAGACGTA ACTTTTATTA CTTCCAGATG
CTGAGTTCAC TCGCCGACCA CTATAAGTTC GATGTCGAAG TGCCCTTCGA ACAGCTGTCG
GATAAGGTGA GAAAAATCGT CCTCTACGGC TCAGGCAAAG ACAGTATCGC CTTCAAATAC
ATCAACGACC GTGGCGATGT GGTGGTGCGT AATCACCCCT TCGAAGGCAT CTTAAATAAT
ATGGACCGGC GCTACCGCGA GACCGAAAGC AACGCGGTAC GCGAAGAATT AGCCAAGTTT
ATCAACACTC AAGCCTGCCA AAGCTGTGGC GGCTCGCGCC TGCGTGAAGA AGCCCGTAAC
GTGTTTATTG GCGATCTTAA CCTGCCCAAA CTCACCGTTT GGTCGATAGG TGAAGCCCTC
GAATACTTCG ACAAACTCGA GTTCAGCGGC CAAAAGGCAC AGATCGCCGA GAAGGTACTG
AAGGAAGTAC GCGATCGCTT AGGCTTCCTC GTTAACGTCG GCCTCAACTA TTTAAGTCTG
TCGCGTTCGG CCGAAACTCT ATCAGGCGGT GAAGCGCAGC GTATTCGTCT CGCCAGCCAA
ATCGGCGCAG GACTCGTTGG TGTGATGTAC GTGCTCGACG AGCCATCTAT CGGCTTGCAC
CAACGGGATA ACGAGCGGTT ATTGCAGACC TTAATCCACT TGCGGGATTT AGGTAACACA
GTGATCGTGG TGGAGCATGA TGAAGATGCG ATTCGTATCG CGGATCATAT TATCGATATC
GGCCCCGGCG CTGGTGTACA CGGCGGCGAA GTGATTTGCG ACGGTCCGAT TGAGAAAATT
GTCGCCTGCG ACGAGTCCGT CACAGGTCAA TATATTTCTG GCAAACGCAA TATCCATATC
AGCACCCCAC GTACGCCTTA CGACCCCAAA CAAGTGATTG AGCTTTACGG CGCCCGTGGC
AATAACCTAC GCAACGTCGA CTTAACGGTT CCCGTAGGCC TGTTCACCTG CGTGACCGGA
GTATCGGGTT CAGGTAAATC GACGCTGATT AACGACACCT TTTTTAGAAT TGCCCATAAG
CAACTCAACG GTGCCACAGT CGATGAGCCC GCACCTTACG ATCGCATCGT CGGCATGGAG
CAATGCGATA AAGTGGTCGA TATCGACCAA AGCCCGATTG GTCGTACTCC GCGCTCTAAC
CCCGCCACTT ATACTGGCAT CTTTACGCCT ATTCGGGAGA TTTTTGCCGC GACGCAGGAA
TCCCGTACCC GTGGTTATCA GGTGGGCCGC TTCTCCTTTA ACGTGAAAGG CGGTCGCTGT
GAGGCCTGCC AAGGCGATGG CTTAATTAAG GTCGAAATGC ACTTCCTGCC CGATGTGTAT
GTGCCCTGCG ATGCCTGTAA AGGTAAACGC TATAACCGCG AAACCTTAGA GGTGCGCTAC
AAAGGCAAGA ACATCCACGA AGTGCTGCAA ATGACAGTGG AAGATGCGCG GGAGTTTTTC
GATGCAGTGC CAGCCATTGC TCGCAAACTG CAAACCCTAA TGGATGTAGG TTTGTCCTAC
GTACGTTTAG GCCAGAGCGC GACCACGCTG TCGGGCGGTG AAGCCCAGCG GGTGAAACTT
GCGAAGGAGC TCTCTAAGCG CGATACGGGT AAGACCTTGT ATATTCTGGA TGAACCGACA
ACGGGCTTGC ACTTTGCCGA TATCCAATTA CTGCTCGATG TACTGCATCG CCTCAAATCC
CACGGCAATA CTATCGTGGT GATTGAGCAT AATCTGGATG TGATTAAAAC CGCAGACTGG
ATTATCGACT TAGGCCCAGA AGGCGGAGGC GGCGGCGGTA CTATCCTAGC AACCGGTACG
CCAGAAGATG TGGCGCAGCA TCCTACATCC CATACCGCGC GCTTCTTAAA GCCGCTGCTG
GAGCGGGATG CTAAGCTAGC CAAGCAGTCA TAA
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| Protein sequence | MDKIEIRGAR THNLKNINLT IPRDKLIVIT GLSGSGKSSL AFDTLYAEGQ RRYVESLSAY
ARQFLSLMEK PDVDHIEGLS PAISIEQKST SHNPRSTVGT ITEIYDYLRL LFARVGEPRC
PTHGQPLAAQ TVSQMVDKVL EMPEDSRLML LAPVVNGRKG EHVKLLEGLS AQGYIRARID
GEVCDLTDPP ALDLHVKHTI EVVVDRFKVR SDIQQRLAES FETALELSGG IAVVASMDEG
TTEELIFSAN FACPHCGYSM AELEPRIFSF NNPAGACPTC DGLGVQQFFD PDRVITNPEL
SLAGGAIRGW DRRNFYYFQM LSSLADHYKF DVEVPFEQLS DKVRKIVLYG SGKDSIAFKY
INDRGDVVVR NHPFEGILNN MDRRYRETES NAVREELAKF INTQACQSCG GSRLREEARN
VFIGDLNLPK LTVWSIGEAL EYFDKLEFSG QKAQIAEKVL KEVRDRLGFL VNVGLNYLSL
SRSAETLSGG EAQRIRLASQ IGAGLVGVMY VLDEPSIGLH QRDNERLLQT LIHLRDLGNT
VIVVEHDEDA IRIADHIIDI GPGAGVHGGE VICDGPIEKI VACDESVTGQ YISGKRNIHI
STPRTPYDPK QVIELYGARG NNLRNVDLTV PVGLFTCVTG VSGSGKSTLI NDTFFRIAHK
QLNGATVDEP APYDRIVGME QCDKVVDIDQ SPIGRTPRSN PATYTGIFTP IREIFAATQE
SRTRGYQVGR FSFNVKGGRC EACQGDGLIK VEMHFLPDVY VPCDACKGKR YNRETLEVRY
KGKNIHEVLQ MTVEDAREFF DAVPAIARKL QTLMDVGLSY VRLGQSATTL SGGEAQRVKL
AKELSKRDTG KTLYILDEPT TGLHFADIQL LLDVLHRLKS HGNTIVVIEH NLDVIKTADW
IIDLGPEGGG GGGTILATGT PEDVAQHPTS HTARFLKPLL ERDAKLAKQS
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