Gene Shewana3_3584 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3584 
Symbol 
ID4476184 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp4300980 
End bp4302404 
Gene Length1425 bp 
Protein Length474 aa 
Translation table11 
GC content50% 
IMG OID639728192 
ProductMltD domain-containing protein 
Protein accessionYP_871212 
Protein GI117922020 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1388] FOG: LysM repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGAAAA CCTTTCGCCA ACCCCATGCC TTAGCTGCGC TCGTGGTCGC CATCTTGATG 
GGCCAGCTAA GCGGCTGCGC AACCACGTCG GCGCAAACGT CGCCTACGGA ATACGCTGCA
ACCTTGCCTG ACGCCCAGGG CAATAGTGAA GAGACAGCAC AACCTCAGCA TTTTGAAACG
GAAGTTATCG ACGAGCGTTA CGCCGATGTG TGGGAAAAAA TTCAACACGC CCGCACCATT
GATGTGCATG ACGATGCCGA AGTCCGCAAA CAGCGTAACT TTTTCGATGA TAAGCAAAAG
TTTATGACTC AGGTGACCCA GCGCGCCGAG CCATTTTTAT ACTATATTGT CAGCCAACTC
GAAGCCCGCA ACATGCCGCT CGAACTGGCA CTCCTGCCGA TTGTTGAGAG TGGTTATAAC
CCGCTAGCTC AGGCAAATGG CCCCGCAGGG CTCTGGCAAA TGATCCCTGC GACGGGACGT
AATTTTGGCC TGACCATCAA CTCGGCCTAC GATGGCCGTA AAGATGCACT GGCCTCGACC
GATGCCGTGC TCGACTATTT ACAACACTTG CATGACACCT TAGGTAACGA CTGGATCAAC
GCCGTTGCGG GTTATAACAG TGGCGAGCTA GTGATCAAAG CCGCTATCGA TAGAAACAAA
GCTAAAGGCA AACCCACGGA TTTCTGGTCG CTGAATATTC CGGCTCGCCA AGTGCAAACC
GTGCCTAAAT GGCTGGCCTT TATTCAAATT ATCCGCGCAC CTAGCCATTA CAATCTCAAG
GTGATGCCGA TTGCCAACCG CCCATTTTTG GAGCGTTTAC CTGCACCTAA CGGGGTTGAA
CTCAGCCAAA TCGCCAATGC TGCGGGACTC ACTAAGGCGG AGTTTAAAAC CTATAACCCT
GGTTATCGCC AAAGCGTGAT CCCAAGTAAG GGCAAATACC AAATCGCCCT GCCGATTGAA
AACATCGGCC AATATCAAGA AAATCAGCAC CAGTTGTCCG CGCAAACACG TTACGACAGC
CAGAGCTATA TTGTGAAATC CGGCGATAGC CTAGGCACAA TTGCCGCGAA ATTTGATATC
TCAGTCAAAG AGTTAAAGCA GGCAAATAAC CTCAACTCCG ATAGAATCAA AATCGGCCAA
GAGTTGACCC TGTTAACGCC GATGAGCAGC GAAGATAACA CCTCGACCGA GACGCCAAAG
CAGAGCAAAG CTCAAACAAC GTCTCAAGCG GCAAAGGCTA AAACCAGCAG TAAAACCGCT
GACAAGCCCA CCGCGAAAGC CAGTACTTAC AAGGTGAAGT CCGGTGACTC GTTAGATAAA
ATCGCGCGTA AAAACAAAGT GAAACTCGCG GATTTAATGA AATGGAACCA GCTGAATGCC
AAGAGCATTA TTAAGTCTGG CCAAGAGCTA AAACTGTCGG AATAA
 
Protein sequence
MRKTFRQPHA LAALVVAILM GQLSGCATTS AQTSPTEYAA TLPDAQGNSE ETAQPQHFET 
EVIDERYADV WEKIQHARTI DVHDDAEVRK QRNFFDDKQK FMTQVTQRAE PFLYYIVSQL
EARNMPLELA LLPIVESGYN PLAQANGPAG LWQMIPATGR NFGLTINSAY DGRKDALAST
DAVLDYLQHL HDTLGNDWIN AVAGYNSGEL VIKAAIDRNK AKGKPTDFWS LNIPARQVQT
VPKWLAFIQI IRAPSHYNLK VMPIANRPFL ERLPAPNGVE LSQIANAAGL TKAEFKTYNP
GYRQSVIPSK GKYQIALPIE NIGQYQENQH QLSAQTRYDS QSYIVKSGDS LGTIAAKFDI
SVKELKQANN LNSDRIKIGQ ELTLLTPMSS EDNTSTETPK QSKAQTTSQA AKAKTSSKTA
DKPTAKASTY KVKSGDSLDK IARKNKVKLA DLMKWNQLNA KSIIKSGQEL KLSE