| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_3579 |
|---|
| Symbol | |
|---|
| ID | 4476179 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. ANA-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008577 |
|---|
| Strand | + |
|---|
| Start bp | 4294551 |
|---|
| End bp | 4295582 |
|---|
| Gene Length | 1032 bp |
|---|
| Protein Length | 343 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 639728187 |
|---|
| Product | aldose 1-epimerase |
|---|
| Protein accession | YP_871207 |
|---|
| Protein GI | 117922015 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2017] Galactose mutarotase and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.496972 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTGCGTT TCAGTGTACT AGATCCTTGG ACCGATCCCC GCGGCGGTGA AATCGAACGT
GTGCGGATAG ACAATGGCAT CATCGCCTTA GAAGTGCTCA GTTTAGGTGG CATCATTCGC
TCACTTTGGA CGCCCGATAA ACAGGGGCAA CGCGCCAATA TCGTGCTTGG CTGCGACAGT
GCCGAAGATT ATCTAACCCA AAACGCCCAC CTTGGCGCTA TCGCAGGGCG CTTTGCCAAC
CGTATTGCGA TGGGCAAGCT GCAATATCAA GAGCAAGAGT ATCAACTGGA TATCAATCAG
GCCAGCAACT GCTTGCACGG TGGCCGCGAA GGTTTTAATC GAAAGAACTG GCACTTAGGC
CAACTTCCCG ACGGTGTGCG TTTATCGTTA GTCAGCCCAG ATGGGGACAT GGGTTTCCCC
GGCAATTGCA CTGTCCAGTT AGACTATCGC CTCGCCGCCA ATAATCTCTA TGTGGAAATC
CTCGCCTCGG TGGATAAACC CTGCCCCGTC AGTCTGACGC AGCATTCCTA CTTCAACCTC
GATGGCTTAC CAAATAATCA TCAGCATCGG ATGCAAATCG ATGCTACGCG CTACCTCACC
ATGAATGAGG TGGGCGTGCC TACGGGGATT GCTGAGGTCA AAAACAGTAT TTTCGATTTA
ACTCAGGGCG TTACTTTTGG GGACAAACTC CAAGATCCGG CGCTGGTCCG CACCCAAGGT
TATGATCATT GTTATCTGCT GGATAATCCC GATGGCGCGC TGCGCCGCTT TGGCTGCCTA
TCGAGCCCTG TCAGTGGCCG CGCCATGACT GTCTTTACTA ATCAGCCCGG CGTGCAGCTC
TACTGCGCTA ACTTTTTAGC GGGAACCTTA GGGCGAAACC AGCAAAGTTT GGCTCAGTAT
CAAGGCGTGT GTATTGAGCC GCAAAAATTG CCTGACTCGC CGAATCAACC CCAATTGGGT
GATGACGCTT GGTTAGTACC GGGGAAAATC TACCATCATA TCAGCCGCTA TCAATTTGAT
ATTGAAGGCT AA
|
|---|
| Protein sequence | MVRFSVLDPW TDPRGGEIER VRIDNGIIAL EVLSLGGIIR SLWTPDKQGQ RANIVLGCDS
AEDYLTQNAH LGAIAGRFAN RIAMGKLQYQ EQEYQLDINQ ASNCLHGGRE GFNRKNWHLG
QLPDGVRLSL VSPDGDMGFP GNCTVQLDYR LAANNLYVEI LASVDKPCPV SLTQHSYFNL
DGLPNNHQHR MQIDATRYLT MNEVGVPTGI AEVKNSIFDL TQGVTFGDKL QDPALVRTQG
YDHCYLLDNP DGALRRFGCL SSPVSGRAMT VFTNQPGVQL YCANFLAGTL GRNQQSLAQY
QGVCIEPQKL PDSPNQPQLG DDAWLVPGKI YHHISRYQFD IEG
|
|---|
| |