Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_3576 |
Symbol | dipZ |
ID | 4476176 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 4289315 |
End bp | 4291156 |
Gene Length | 1842 bp |
Protein Length | 613 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 639728184 |
Product | thiol:disulfide interchange protein precursor |
Protein accession | YP_871204 |
Protein GI | 117922012 |
COG category | [C] Energy production and conversion [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG4232] Thiol:disulfide interchange protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.784092 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAAC TACTTAGCTT TATCTTCACC GCATTACTGC TGCTTGCGCC CTTAACTCAA AGTAGCAATG CCTTCGCCAA TAGCTTCGGT TTTCTAAAAA GTGAGCCAGA GTTAATGCCT GTCGATCAAG CCTTTGCCTT CGATTTTAAG CAGGAAGGCA ATAAGGTCAC CCTCAATTGG GTCATTGCCG ACGGCTACTA TATGTATCGG GATAAGCTTA AGTTTAGTGT CAATGGCGCC GAACTTGGCA CCATAGATCT GCCAAAGGGC AAACCCCACA ACGACGAATA TTTCGGTGAG CAAGAGGTGT ACTACACCTA TATCGATATT CCCGTTGGCC TGAAACAAGC CGATGATAAC GGCACCTTAA CCGTGACCTT TATGGGCTGC GCCGAGGGTA AACTCTGTTA TCCACCGACC AAGCGCGATG TCACCCTAAA AGCTGTCGCG GCCAATGATG GCCAAATCGC GACTGGTACA GACAGCAGCG AAAATTCTGA GTCTGCCGCC ACTGCTGACG CTAAGCAAAC TAGCAGCGTC CCAAGCCAAC CTATTACCCA GCAGGATAGC CTAAGCCAGA TGCTGTCTAA CGACAGTTTA CTCTGGACCT TAGTGATCTT CTTCGGCCTA GGGATTGGTC TGGCGCTCAC GCCTTGCGTC TTCCCTATGT ACCCGATCCT ATCGGGCATT ATTGTTGGCC AAGGGCAAAA ACTCTCGACC GCTAAGGCCT TTACCCTGTC GATGGCCTAT GTGCAGGGTA TGGCGATCAC CTACTCGATT TTAGGTCTAG TGGTTGCCTC TGCGGGGATG AAATATCAAG CGGCGCTGCA ACATCCCGCC GTGCTGATCT TTTTAGCTAT CCTGTTCTTT GTACTCAGTT TATCCATGTT TGGCTTGTAC GATCTCAAAC TGCCTTCAAG CTGGCAGGAG AAGATGAACT CGATTTCAAA CAATCAAAAG GGCGGCAATT TAGTTGGCGT GTTTTTGATG GGGGTGATAT CGGGATTAGT GGCCTCACCT TGTACAACGG CCCCACTTTC AGGCGCCTTA GTCTATGTGG CGCAAACCGG TGATTTATTG CAAGGTTTCC TCGCGCTCTA CGTGCTGAGC ATGGGTATGG GTGTGCCGCT ACTTATCATT GGTACCTCGG GTGGTAAGTT ACTGCCACGC GCTGGCGCTT GGATGAACAT CATTAAAACC GTGTTCGGTT TCCTCCTGAT TGCCGTATCG ATTGTGATGC TTGGCCGTAT TTGGACGGGT GTGGTTTCCG ATGTGCTCTG GTCACTCTGG GGCATTAGCT TCACCGGTTA CCTGATGCAC CAAAACAAAC TCAGCGCCTT CAACTGGAAA CAAACCGTGC GCTCAGTGCT GCTGACACTC ACGCTGTTGG CCAGTTTCTC CTACGGTTTC CAAGCGGTCA TGGGCCACTT TGGCTTTACC CATGCGCCAA TGGGCACTGT GGCGACAACC GAGCAGGAGC ACGGCTTTAA ACGGATTAAA TCTATTGAAG ATTTAGACCG TGAAATCGCC GCCGCAACCG CTGCGGGTAA GCCTGTGATG CTGGATCTCT ACGCCGATTG GTGTGTGGCC TGTAAAGAGT TTGAGGCCAT CACCTTTAAG GACGCCGAAG TGCTAGTGCG GATGAACAAG ATAGTGTTAT TACAGGCCGA CGTGACTAAG AGCGATGCCG TGGATGTGGC ACTGCTAGAG AAATACAATG TGCTGGGCCT ACCGACGCTG CTGATGTTTA ACGAGCAAGG TGAGCAGAGG GAAGATTTAA GAGTGACTGG CTTTATGGGA CCGAAGGAAT TTGCCGCCCA TTTAGATCAC TTAGTGAAAT AA
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Protein sequence | MKKLLSFIFT ALLLLAPLTQ SSNAFANSFG FLKSEPELMP VDQAFAFDFK QEGNKVTLNW VIADGYYMYR DKLKFSVNGA ELGTIDLPKG KPHNDEYFGE QEVYYTYIDI PVGLKQADDN GTLTVTFMGC AEGKLCYPPT KRDVTLKAVA ANDGQIATGT DSSENSESAA TADAKQTSSV PSQPITQQDS LSQMLSNDSL LWTLVIFFGL GIGLALTPCV FPMYPILSGI IVGQGQKLST AKAFTLSMAY VQGMAITYSI LGLVVASAGM KYQAALQHPA VLIFLAILFF VLSLSMFGLY DLKLPSSWQE KMNSISNNQK GGNLVGVFLM GVISGLVASP CTTAPLSGAL VYVAQTGDLL QGFLALYVLS MGMGVPLLII GTSGGKLLPR AGAWMNIIKT VFGFLLIAVS IVMLGRIWTG VVSDVLWSLW GISFTGYLMH QNKLSAFNWK QTVRSVLLTL TLLASFSYGF QAVMGHFGFT HAPMGTVATT EQEHGFKRIK SIEDLDREIA AATAAGKPVM LDLYADWCVA CKEFEAITFK DAEVLVRMNK IVLLQADVTK SDAVDVALLE KYNVLGLPTL LMFNEQGEQR EDLRVTGFMG PKEFAAHLDH LVK
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