Gene Shewana3_3576 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3576 
SymboldipZ 
ID4476176 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp4289315 
End bp4291156 
Gene Length1842 bp 
Protein Length613 aa 
Translation table11 
GC content50% 
IMG OID639728184 
Productthiol:disulfide interchange protein precursor 
Protein accessionYP_871204 
Protein GI117922012 
COG category[C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG4232] Thiol:disulfide interchange protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.784092 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAC TACTTAGCTT TATCTTCACC GCATTACTGC TGCTTGCGCC CTTAACTCAA 
AGTAGCAATG CCTTCGCCAA TAGCTTCGGT TTTCTAAAAA GTGAGCCAGA GTTAATGCCT
GTCGATCAAG CCTTTGCCTT CGATTTTAAG CAGGAAGGCA ATAAGGTCAC CCTCAATTGG
GTCATTGCCG ACGGCTACTA TATGTATCGG GATAAGCTTA AGTTTAGTGT CAATGGCGCC
GAACTTGGCA CCATAGATCT GCCAAAGGGC AAACCCCACA ACGACGAATA TTTCGGTGAG
CAAGAGGTGT ACTACACCTA TATCGATATT CCCGTTGGCC TGAAACAAGC CGATGATAAC
GGCACCTTAA CCGTGACCTT TATGGGCTGC GCCGAGGGTA AACTCTGTTA TCCACCGACC
AAGCGCGATG TCACCCTAAA AGCTGTCGCG GCCAATGATG GCCAAATCGC GACTGGTACA
GACAGCAGCG AAAATTCTGA GTCTGCCGCC ACTGCTGACG CTAAGCAAAC TAGCAGCGTC
CCAAGCCAAC CTATTACCCA GCAGGATAGC CTAAGCCAGA TGCTGTCTAA CGACAGTTTA
CTCTGGACCT TAGTGATCTT CTTCGGCCTA GGGATTGGTC TGGCGCTCAC GCCTTGCGTC
TTCCCTATGT ACCCGATCCT ATCGGGCATT ATTGTTGGCC AAGGGCAAAA ACTCTCGACC
GCTAAGGCCT TTACCCTGTC GATGGCCTAT GTGCAGGGTA TGGCGATCAC CTACTCGATT
TTAGGTCTAG TGGTTGCCTC TGCGGGGATG AAATATCAAG CGGCGCTGCA ACATCCCGCC
GTGCTGATCT TTTTAGCTAT CCTGTTCTTT GTACTCAGTT TATCCATGTT TGGCTTGTAC
GATCTCAAAC TGCCTTCAAG CTGGCAGGAG AAGATGAACT CGATTTCAAA CAATCAAAAG
GGCGGCAATT TAGTTGGCGT GTTTTTGATG GGGGTGATAT CGGGATTAGT GGCCTCACCT
TGTACAACGG CCCCACTTTC AGGCGCCTTA GTCTATGTGG CGCAAACCGG TGATTTATTG
CAAGGTTTCC TCGCGCTCTA CGTGCTGAGC ATGGGTATGG GTGTGCCGCT ACTTATCATT
GGTACCTCGG GTGGTAAGTT ACTGCCACGC GCTGGCGCTT GGATGAACAT CATTAAAACC
GTGTTCGGTT TCCTCCTGAT TGCCGTATCG ATTGTGATGC TTGGCCGTAT TTGGACGGGT
GTGGTTTCCG ATGTGCTCTG GTCACTCTGG GGCATTAGCT TCACCGGTTA CCTGATGCAC
CAAAACAAAC TCAGCGCCTT CAACTGGAAA CAAACCGTGC GCTCAGTGCT GCTGACACTC
ACGCTGTTGG CCAGTTTCTC CTACGGTTTC CAAGCGGTCA TGGGCCACTT TGGCTTTACC
CATGCGCCAA TGGGCACTGT GGCGACAACC GAGCAGGAGC ACGGCTTTAA ACGGATTAAA
TCTATTGAAG ATTTAGACCG TGAAATCGCC GCCGCAACCG CTGCGGGTAA GCCTGTGATG
CTGGATCTCT ACGCCGATTG GTGTGTGGCC TGTAAAGAGT TTGAGGCCAT CACCTTTAAG
GACGCCGAAG TGCTAGTGCG GATGAACAAG ATAGTGTTAT TACAGGCCGA CGTGACTAAG
AGCGATGCCG TGGATGTGGC ACTGCTAGAG AAATACAATG TGCTGGGCCT ACCGACGCTG
CTGATGTTTA ACGAGCAAGG TGAGCAGAGG GAAGATTTAA GAGTGACTGG CTTTATGGGA
CCGAAGGAAT TTGCCGCCCA TTTAGATCAC TTAGTGAAAT AA
 
Protein sequence
MKKLLSFIFT ALLLLAPLTQ SSNAFANSFG FLKSEPELMP VDQAFAFDFK QEGNKVTLNW 
VIADGYYMYR DKLKFSVNGA ELGTIDLPKG KPHNDEYFGE QEVYYTYIDI PVGLKQADDN
GTLTVTFMGC AEGKLCYPPT KRDVTLKAVA ANDGQIATGT DSSENSESAA TADAKQTSSV
PSQPITQQDS LSQMLSNDSL LWTLVIFFGL GIGLALTPCV FPMYPILSGI IVGQGQKLST
AKAFTLSMAY VQGMAITYSI LGLVVASAGM KYQAALQHPA VLIFLAILFF VLSLSMFGLY
DLKLPSSWQE KMNSISNNQK GGNLVGVFLM GVISGLVASP CTTAPLSGAL VYVAQTGDLL
QGFLALYVLS MGMGVPLLII GTSGGKLLPR AGAWMNIIKT VFGFLLIAVS IVMLGRIWTG
VVSDVLWSLW GISFTGYLMH QNKLSAFNWK QTVRSVLLTL TLLASFSYGF QAVMGHFGFT
HAPMGTVATT EQEHGFKRIK SIEDLDREIA AATAAGKPVM LDLYADWCVA CKEFEAITFK
DAEVLVRMNK IVLLQADVTK SDAVDVALLE KYNVLGLPTL LMFNEQGEQR EDLRVTGFMG
PKEFAAHLDH LVK