Gene Shewana3_3564 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3564 
Symbol 
ID4476164 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp4273979 
End bp4274785 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content44% 
IMG OID639728172 
Producthypothetical protein 
Protein accessionYP_871192 
Protein GI117922000 
COG category[S] Function unknown 
COG ID[COG1432] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00288] conserved hypothetical protein TIGR00288 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0656546 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGAATA AAGAAAAAAT TGCGGTGTTT ATTGATGCCG ATAATGCGCC AGCCAGAAAG 
TTTGACGTGG TACTCGCTGA GCTTGCAAAA CACGGTCTCA TCAGTATTCG AAAGGCCTAT
GGCAACTGGA AAAGCCCGAA CCTAAAGCCA TGGGAAGAAA TTCTCCATGA ATATGCCATT
CAGCCCATCC AACAATTCGA TTTAACCAAA GGTAAAAATG CCAGTGATAT CGCTTTAGTT
ATTGATGTTA TGGATATTCT TTACACAAAG GATATAGACA TTATTTGCTT AATTTCTTCG
GATTGCGACT TTACTCCCCT TGTAACCAGA GCCTTAGCCG ACGGTAAAAC CGTTTTTGGT
TTCGGAGAAC GTAAAGCGCC AGCCGCTTTC GTAAATAGCT GCTCTCGCTT CCTCTACCTC
GACGCTGAAC CTGTAGTCGT CGCAGAAGAA ATTGAAGTGA TATCAGAAGC CACTCAGCCT
CCACCAACGG CACCTGACTC AATCAGTAAA ACCGAGCAAG CTCAGCCCAA AATCGCCACA
CCACAAAAAT GTAATTTAAA AAGTGACACC AAACTGCTCA ATATGTTGCG ACAGGCCATA
GAAGCAACCG AAGAGGAAGA TGGCTGGGCA CAACTCGGCC CAATTGGTTC ACATATCTCC
AATCACAGCT CGTTCGATCA GCGAAACTAC GGATTTAAAA AACTCAGCGA TCTCTTTGCC
GCAATCGATC TCTTCGAAAT GCGTAAAACC CACGGCTCAG TGCTATGGGT AAGAGATATC
AAACGCGCAA AGAAGAATGG AAGATGA
 
Protein sequence
MQNKEKIAVF IDADNAPARK FDVVLAELAK HGLISIRKAY GNWKSPNLKP WEEILHEYAI 
QPIQQFDLTK GKNASDIALV IDVMDILYTK DIDIICLISS DCDFTPLVTR ALADGKTVFG
FGERKAPAAF VNSCSRFLYL DAEPVVVAEE IEVISEATQP PPTAPDSISK TEQAQPKIAT
PQKCNLKSDT KLLNMLRQAI EATEEEDGWA QLGPIGSHIS NHSSFDQRNY GFKKLSDLFA
AIDLFEMRKT HGSVLWVRDI KRAKKNGR