Gene Shewana3_3560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3560 
Symbol 
ID4476160 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp4267872 
End bp4269179 
Gene Length1308 bp 
Protein Length435 aa 
Translation table11 
GC content49% 
IMG OID639728169 
Productradical SAM domain-containing protein 
Protein accessionYP_871189 
Protein GI117921997 
COG category[R] General function prediction only 
COG ID[COG0641] Arylsulfatase regulator (Fe-S oxidoreductase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.291344 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAAAA CTTCAATGCG AGCATCAACG ATACTCGATG TCGTACCGTT AAAATCAGCT 
GCAAAGGCGC TTGGAGAGCA TCCCGATTAC CAACGTCGTT TCCACGTGAT GGCCAAACCC
GGTGGGGCGA AATGTAACAT CGATTGCCAA TATTGTTTTT ATCTGCACAA AGAAGGCTTA
TTGCATCAAC CTAAGCAACC TGAGATGGAT GATGCGACCC TCGAGGCCTA TGTTAAAGGT
TATATCGAAA GCCAAGATGG CGACGAAATC GTATTCTCAT GGCAGGGTGG CGAGCCGACC
CTGTTGGGCG TGGACTATTT TCGCAAAGTA GTTCAGCTAC AGAAAAAATA TCGGCCCCTA
GGCGTTAACA TTGAAAACGA TCTGCAAACC AACGGCATTC TATTAAACGA TGAATGGTGC
CAGTTTCTTG CCGAGCATAA TTTCCTTGTG GGGTTATCCA TCGACGGTCC CGAAGAACTC
CATAACAAAT ATCGTGTGAC CCGCAGCGGC AAGCCTACCT TTCATTTAGT GATGGCCGCG
GTCGAAAAAC TCAAACAATA CAAGGTGCGT TTTAATGCCT TAGTGACGGT TAACCGCCAC
AATGTGAAGT ACCCGCTCGA AGTTTACCGC TTTGTCACCA AAGAGTTGGG TGCGACCTAT
ATCCAGTTCA ATCCTGTGGT CGAACCTAGC GATTTTAAAA CCACGGCGCC GCAGTTTTGG
AACAGCAGCA TGATACCCAC GGTCGGCAGC GAGCTGGCGA AACCTGGGCA TCCTATGTCT
GTGGTGACGG ATTGGTCAGT CGATGCCGAT GACTGGGGCA AGTTCCTCAT CGTCACCTTT
GAAGAGTGGA TCAACAACGA CCTTGGCCGA GTGCTGGTTA ACCTGTTTGA GACGGCGGTC
GCCCAAGTGA TGGGCAAACC GGCGCAGCTT TGTATTACCG CTGAGTTTTG CGGTAAGGGC
TTAGCCATTG AACATAATGG CGATGTCTTT AGTTGTGACC ATTACGTTTA CCCCGAATAT
AAGATTGCCA ATGTGCACGA GCGCCCACTC AATGAAATGG CGTTCTCGAC CCGGCAATTA
ACCTTCGGCT TAGCCAAGCG TGATTCGTTA CCCCAATACT GTAAAGACTG CCCTTATCTC
AAACTCTGTT GGGGCGAATG CCCTAAAAAT CGCCTGCTGA AAACCCCAGA TGGGGAAGAA
GGGCTCAATT ATCTGTGTCC AGGGATTAAA GCATTTTTCG ATTATTCGTT GCCGATTCTC
ACGGGATTGG CCGTATTGCT AGGACAACCA CATGGAACCA ATGGCTAA
 
Protein sequence
MTKTSMRAST ILDVVPLKSA AKALGEHPDY QRRFHVMAKP GGAKCNIDCQ YCFYLHKEGL 
LHQPKQPEMD DATLEAYVKG YIESQDGDEI VFSWQGGEPT LLGVDYFRKV VQLQKKYRPL
GVNIENDLQT NGILLNDEWC QFLAEHNFLV GLSIDGPEEL HNKYRVTRSG KPTFHLVMAA
VEKLKQYKVR FNALVTVNRH NVKYPLEVYR FVTKELGATY IQFNPVVEPS DFKTTAPQFW
NSSMIPTVGS ELAKPGHPMS VVTDWSVDAD DWGKFLIVTF EEWINNDLGR VLVNLFETAV
AQVMGKPAQL CITAEFCGKG LAIEHNGDVF SCDHYVYPEY KIANVHERPL NEMAFSTRQL
TFGLAKRDSL PQYCKDCPYL KLCWGECPKN RLLKTPDGEE GLNYLCPGIK AFFDYSLPIL
TGLAVLLGQP HGTNG