| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_3545 |
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| Symbol | |
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| ID | 4476145 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 4247736 |
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| End bp | 4252655 |
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| Gene Length | 4920 bp |
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| Protein Length | 1639 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 639728154 |
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| Product | hypothetical protein |
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| Protein accession | YP_871174 |
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| Protein GI | 117921982 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01451] conserved repeat domain
[TIGR03501] gammaproteobacterial enzyme C-terminal transmembrane domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTACAA TGAATAAAGT CGCCGTTATG GTGGCTACTG CTTTGTACGT TGGTAGCGGT
GTCGCTTCGA CTACAACAGT TGCGCCATCT AATGAGCTAA ACGCCGTCTG GGCAACGCAA
CCTGCGGATT ATGCTCCAAA GCCACTAGCG GAAGAAACCT TTACTTGGGA AAACCAAGTA
AACAAAACCA TTAAAAAACA GCGCGAAATC TTCATTGCTG AAGATGATGT TCATGGCGTA
CAGAAATATA TTGTACAGCT CAATGATGCG CCAATTGCTA CCTACGAGGG TGGTATTGCC
CAACTCGCGG CAACCCAACC TACTGTTGCT AAAGTTCGTG GTACAAGTTC GCCTCTGAAT
CTGAATCAAC CTCAGCTAAA AGCTTATAAC AACTATCTTG CTGAGAAGCG TGCTAACTTT
GTGGCACAGG CGCAGGCATT ACAAGGGGTG GATGTTAAAG TAAGCCGTGC ATTTTCGGTC
GCACTTAACG GTTTCGTGAC TGAAATGACC CAAGAACAGG CACAACGTCT GGCAAAAGTG
CCTGGTGTTA AGCGTATTAC CCGTGAAAAA ATCTATGATT TAAAAACCTT CAGTACGCCA
GCACAAACTG GTGCAACTAG CGTTTGGAAT ACAAGTGCGT TAAATACCTT GTCTAATAAA
GGTGAGGGTA TGGTGGTCGG TATCATTGAT ACTGGTATTA ACTATGATCA TCCTTCATTT
GCTGCCGTGG GTGGTGATGG TTATAAACAC ATTAATCCTC TGGCAGGTAA ATACTTAGGG
GATTGTGCTG ATTCACCAGA GTACTGTAAC GATAAGCTGA TTGGTATCTA TTCATACCCA
GAGATCACAC AGGCTTACAC AGATCCTGTG TTTAGTGAAA CCCGCCCTGC AGTGGGGGTA
GACTATAACA ACCATGGTTC GCATGTCGCG GGTACCGTTG CAGGTAACAT CTTGAATAAT
GTTGCGCATA CGACTACTGA CTTCATCGCT CAGAGTAAAG GGACTGAAAC AGGCCTTAAG
TTTGACCAAG TGTCAGGTAT GGCGCCACAC GCGAATATCA TTGCATACCA AGTATGTTGG
CCTGGTGGTT CGGGTGACCC TTATGCTGGT TGTCCGAGCT CAGCCATTAT TGCCGCGATT
GAGCAATCGG CAATCGATAA TGTTGATGTT ATCAACGCTT CGTTAGGTTC GCTTGAGGAG
GACCCATGGT TAGATCCAAT GGAGCAAGCC TTTTTAAACG CGGCAGCCTC GGGCGTATTT
GTTGCGGTTG CTGCGGGTAA TTCTGGGCCT GACTTGATGA CGGCTGACCA TTCATCACCT
TGGGTAACCA CAGTTGCAGC TCACACAGCA GACCAAGTTG TTGGTTTCAA AAAGAATACT
GTTGAGAATA TGTCTGGTGG CGCGACTGCT GCACCAGCGG ATATTGTCGG TGCAACTCGT
AACTTCAATT CAGTGACGGG TTTAATGGTT GATGCGAGTA AATTCAAAAA CGCCAATGAA
CCTGTTGCAT CCTACGTTAA GAACTGTGAT AAGCCGTTCC CTGAAGGCAC GTTCGATCTG
GCTGATAACC CAGATACAGA GGTTGATGAA AGCGCGCAGG ACGTCATAGT GCTTTGTTCT
CGCAGTTCAT TCCCATTGAT GACTAAAGCG GCAAACGTAC AGGCGGGCGG TGCGGAAGGT
ATTGTTATTT CTAATCTTTC ATCAGTTCAA GATTCTAGCG CGCCAGAAAT CCCTTATGCG
GTCCCCGGTT CATTGATCAA GTATGCCGAT GGTGCGAAGC TTCGTACTTG GTTAGCATCT
GGCTCAGGCC ATATGGCGAC GATCACAGCT GGTGCTGCTG AAATTAAAGA AGTTGATAAA
GAGCGTGTCG CTAACTTCTC TGGCCGTGGT CCATCTTATT TTGGTATCGA TACCCTATTT
GTGGATATCG CAGCTCCTGG TGTGGATATT TTTGCTGCCG CCTCTGATGA TCAACCATTT
ACCAAAAATC CTTCAACGGG CGATTGGGCG ACCCTATCTG GTACCTCAAT GGCTAGTCCT
CATGTTGCTG GTGCGGCGGC GTTATTACGT CAGTCACACC CCGACTGGTC ACCGATGCAA
GTTCAATCGG CGCTATTGAT GACGGCATCT AACGATCTGA CAAGTGCAGG ATTTTTAGAC
AACTACTCAG ATTATGGTGA TATGTCAGCC CTGCAAGATG TGGGTGCGGG TCGTATGCAC
GTTGAGTTAG CCGATAAAGT CGGTTTAGTA CTCGATGAGT CAATGGACAA TATGGCTGCA
GCTAACCCAA ATGCGGGTGG TCGTCCTAAG AACCTGAACA CAGCTTATAT GGTCGATAAT
GAATGCCCTA CGGAATGTTC ATTTGTGCGA ACCTTTACTG CTACTGAAGA TGCGACTTGG
ACCGTCAGCA CTGAAACGTG GATTGGCAAC TTTGATGTTA GTGTTTCGCC ACAAAGCTTT
ACGATTAAGG CGGGCGAAAC CCAGTCTATC GTAGTCACCG CTAAGACGAA AAAGAACGTA
GCTGGGACCA CTGTAATCGA TTTAACCGGT AACCAAGGTC AGGTGGTTCT TACTTCAGAT
GTACCAAACT CGCCAGTGCT TGAACTGCCA GTATGGACTT ATGAAGGCGA GACTGGGTTA
CCTGAGTACT TGAAAATTAA CGCTCACCGT AAATCATCAA CCCTAAACGT AGGCCCATTC
AATACCGCTG AAATCACCGA TTTCACTGCG CGTAGTTTTG GCTTAGTAAA AGGTGAAGAT
AAGACGGTTC ACTTGTATAC CGACAAAACG GGTGGTGATC CATTTGACAC TGTTGAGGTG
GATGGTAAAC AAGTCGTTAA TGCGAACCAC GTAGAATGGA CTGATGTGCC TGAGGGTGCC
AAGTTACTTG CGGCTAGCGT AGGTGGAAGT GAATACGCCA GAGTGCTGGT ATTTATGGGG
CAAGACACCG ATGGTGACGG TTTACCATCA ATGGATGAAA CCCTATGTAT GTCTACCACT
TATACTATTG CTAACTTCTG TACCATCACA AATCCACAGG CGGGTCGTTA CTTTACCGTC
TATATGAACT TGGCGACCAT CTCAACGGGT CAAACAGATA TGGGGCGTGA TGTTACTTTC
TCAACTGCGG TTGTGACGGG AGATAACGGT AACTTAACCG TTAAAGCACC TTCGCAAATC
CCAGGTTACG AAGAGTACAA CGTAGAACTG GCTTACCATC TTCCAGAGAT GGAGGTTGGT
AACACTTACT TTGGTGGCTT CGACATAGGC ACTAATGCCA ATGATGCGGG CAACGTAGGT
TTTGTACCTG TGATTGTTAA CCAAGTCGAT AAAGATGTGA CCTTCACCGC TAACCGTGAA
ACGGCGCATG CTGGCGAAGT GGTTGAGTTC CAAGTAAATG TCATCGCTAA CAATGAAGCG
GCTGCTAGAG ATTTTGCAAT CAAGACTCAA TTCCCTGATA GCATTCAAAT TATCCCTGAT
AGCATTGTTG CATCTAATGC CACACCTGGT TCAGCGGTAT TCGAAAACAA CAACTTCAGT
GTATCAGGTG TACAGGAAAC CACTAAGGAT GTTGTCCGTA ACTATAAGAT CACTAATAAC
CAGAATGATC CTATGTGTTC CCTTAAAGCG GCGAACTCTC CTTACCCAGG TTATCTGGAG
CTGAAGGAAG GTTTAGGTTG GAGAACCTTA GAGGGCGTGC AAGGTACCTA TAGAAACCAG
TTCACGTACT CGCTTAAGGA TCTGATGAAT ACCAGTCAGG ATATTAGTTT TCCATTGTTT
AACAAATACT TTGTTGACAC TATCACCTTG AGTCCTGCGG GTATTATATC CTTCAACTCT
GCACGTAGAT TGCCGTTCAT GCATGTTGAG TTTCCTAAGG ATGTCGCTGG GTTACCAATG
CCGGAATATG CTATCGCACC TTACTGGGTG GGTGATAACA CCATTCCAGC TCGTTACGAC
GGCGGTTATG GTCAGTATCA TCTGAACGCA GGTATTACCC CAACTTATAC TTCTTCACGT
GAGTGGTTAG TACTGGAGTG GGATAACGTG GAGCGTACAG GCACTCCGGG TCAACTTGTT
GACTTCGAAA TGTTCCTACG CATGAATGTG AACTTCGAAC CTGGCAAATA TGAAATGTTA
TTTGCCTATG ACAATCTACA AATGGTGGAT GGCCAAGGTG CTATTGGTTT TAAAGCGGCC
GATGGTCGTA TCTTAGTTGA TGGTGATATG CCTGTGGATA TAAACCTTGG TGCTTCAGTT
GCCTACAACA ACTTAGATAA AGTTCTCAGC GATGAATATG TGGTTTGTAT GGATTATACC
GGTCCAGAAG AGTCACAGTT TAACGTGAAG TTCACTGCCT ATGTATCTGA AAAGGCAGCG
GGTACAACTC AAACACTCAA AGTTGAAAAC CACTTAGTGG GTGCCGACAG TGAAGTGCTT
GAGCTGCAAC TTGAGGTGGC GGGCAACATT CAACTGGCAG CCATTACCAA TAAGACGGTT
AAAGAAAATG AATCCATTAG TTTCGACGTG CTCTACTCGG ATGAAAACCA AGTGAGTAAT
GTGATTGAAG TGATGGGGGA TAACTTTACG GTAACCGTGA ATGGTAACAA TGTGACATTA
ACTCCAACGG CAAACTTCCA TGGTGAAACC TTAGTCACTG TTAGAGTAAA AGACCGCGTG
AATCCAGAAG ATGCGGCATC GACTAGTTTC AGCTTAATGG TTAAGTCCGA CGGTATTGAG
TATGGTTGTA CTAACAGCAG CGCCACTAAC TATGACGCTT CGGCCAATAC CGATGATGGC
AGTTGTAAGT TGCCGGTTGT CACCATCGAA CCTGAAGCGA AAAGCTCGGG TGGTGCCTTA
GGTTGGTTAG CCTTAGGCTT GCTTCCTTTA GCTTACAGAC GAACTCGCAA AATACATTAA
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| Protein sequence | MLTMNKVAVM VATALYVGSG VASTTTVAPS NELNAVWATQ PADYAPKPLA EETFTWENQV
NKTIKKQREI FIAEDDVHGV QKYIVQLNDA PIATYEGGIA QLAATQPTVA KVRGTSSPLN
LNQPQLKAYN NYLAEKRANF VAQAQALQGV DVKVSRAFSV ALNGFVTEMT QEQAQRLAKV
PGVKRITREK IYDLKTFSTP AQTGATSVWN TSALNTLSNK GEGMVVGIID TGINYDHPSF
AAVGGDGYKH INPLAGKYLG DCADSPEYCN DKLIGIYSYP EITQAYTDPV FSETRPAVGV
DYNNHGSHVA GTVAGNILNN VAHTTTDFIA QSKGTETGLK FDQVSGMAPH ANIIAYQVCW
PGGSGDPYAG CPSSAIIAAI EQSAIDNVDV INASLGSLEE DPWLDPMEQA FLNAAASGVF
VAVAAGNSGP DLMTADHSSP WVTTVAAHTA DQVVGFKKNT VENMSGGATA APADIVGATR
NFNSVTGLMV DASKFKNANE PVASYVKNCD KPFPEGTFDL ADNPDTEVDE SAQDVIVLCS
RSSFPLMTKA ANVQAGGAEG IVISNLSSVQ DSSAPEIPYA VPGSLIKYAD GAKLRTWLAS
GSGHMATITA GAAEIKEVDK ERVANFSGRG PSYFGIDTLF VDIAAPGVDI FAAASDDQPF
TKNPSTGDWA TLSGTSMASP HVAGAAALLR QSHPDWSPMQ VQSALLMTAS NDLTSAGFLD
NYSDYGDMSA LQDVGAGRMH VELADKVGLV LDESMDNMAA ANPNAGGRPK NLNTAYMVDN
ECPTECSFVR TFTATEDATW TVSTETWIGN FDVSVSPQSF TIKAGETQSI VVTAKTKKNV
AGTTVIDLTG NQGQVVLTSD VPNSPVLELP VWTYEGETGL PEYLKINAHR KSSTLNVGPF
NTAEITDFTA RSFGLVKGED KTVHLYTDKT GGDPFDTVEV DGKQVVNANH VEWTDVPEGA
KLLAASVGGS EYARVLVFMG QDTDGDGLPS MDETLCMSTT YTIANFCTIT NPQAGRYFTV
YMNLATISTG QTDMGRDVTF STAVVTGDNG NLTVKAPSQI PGYEEYNVEL AYHLPEMEVG
NTYFGGFDIG TNANDAGNVG FVPVIVNQVD KDVTFTANRE TAHAGEVVEF QVNVIANNEA
AARDFAIKTQ FPDSIQIIPD SIVASNATPG SAVFENNNFS VSGVQETTKD VVRNYKITNN
QNDPMCSLKA ANSPYPGYLE LKEGLGWRTL EGVQGTYRNQ FTYSLKDLMN TSQDISFPLF
NKYFVDTITL SPAGIISFNS ARRLPFMHVE FPKDVAGLPM PEYAIAPYWV GDNTIPARYD
GGYGQYHLNA GITPTYTSSR EWLVLEWDNV ERTGTPGQLV DFEMFLRMNV NFEPGKYEML
FAYDNLQMVD GQGAIGFKAA DGRILVDGDM PVDINLGASV AYNNLDKVLS DEYVVCMDYT
GPEESQFNVK FTAYVSEKAA GTTQTLKVEN HLVGADSEVL ELQLEVAGNI QLAAITNKTV
KENESISFDV LYSDENQVSN VIEVMGDNFT VTVNGNNVTL TPTANFHGET LVTVRVKDRV
NPEDAASTSF SLMVKSDGIE YGCTNSSATN YDASANTDDG SCKLPVVTIE PEAKSSGGAL
GWLALGLLPL AYRRTRKIH
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