Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_3533 |
Symbol | |
ID | 4476133 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 4233100 |
End bp | 4233642 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 639728142 |
Product | isochorismatase hydrolase |
Protein accession | YP_871162 |
Protein GI | 117921970 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1335] Amidases related to nicotinamidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTAAAAC CTGAAGAATG TGTACTCGTT ATCGTCGATG TGCAGGGAAA GCTCGCTCAG ATCATGGATA ACTCAGCCAA GCTTCATCAG CAGTTGAGTA CGCTTATCCA AGGCGCACAA CTGTTTGAAA TCCCCATCCT CTGGCTTGAG CAATTACCCG CCAAGCTTGG CTCGACCACA GAAGAGCTAA AAACCTTGCT CGAAAGAACT GGCTCGCCCA TTGCCAAGCA ACATTTTAGC GGTTGGTATT GTGATGAATT TGCCAATGCA TTAACCCAAA CTCGACGCAA ACAGGTGCTG CTGGCGGGGA TAGAAACCCA TGTTTGCGTG TACCAAACCT GCCGCGATCT ACTCGACCAG CACTACTCGG TGCACCTTGT CGCCGATGCC GTTTCTTCCC GCAGCGTTGA CAATAAACAG CTGGGCATCC AGATGATGAC AGCCAAGGGA GCCACTCTTA CCAATGTGGA GTCACTGTTG TTTGAACTGC AACATGAAGC TCAGGGCGAT ATATTTAAGG CACTGATTAA ATTGATTAAA TAA
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Protein sequence | MLKPEECVLV IVDVQGKLAQ IMDNSAKLHQ QLSTLIQGAQ LFEIPILWLE QLPAKLGSTT EELKTLLERT GSPIAKQHFS GWYCDEFANA LTQTRRKQVL LAGIETHVCV YQTCRDLLDQ HYSVHLVADA VSSRSVDNKQ LGIQMMTAKG ATLTNVESLL FELQHEAQGD IFKALIKLIK
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