Gene Shewana3_3533 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3533 
Symbol 
ID4476133 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp4233100 
End bp4233642 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content48% 
IMG OID639728142 
Productisochorismatase hydrolase 
Protein accessionYP_871162 
Protein GI117921970 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1335] Amidases related to nicotinamidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAAAAC CTGAAGAATG TGTACTCGTT ATCGTCGATG TGCAGGGAAA GCTCGCTCAG 
ATCATGGATA ACTCAGCCAA GCTTCATCAG CAGTTGAGTA CGCTTATCCA AGGCGCACAA
CTGTTTGAAA TCCCCATCCT CTGGCTTGAG CAATTACCCG CCAAGCTTGG CTCGACCACA
GAAGAGCTAA AAACCTTGCT CGAAAGAACT GGCTCGCCCA TTGCCAAGCA ACATTTTAGC
GGTTGGTATT GTGATGAATT TGCCAATGCA TTAACCCAAA CTCGACGCAA ACAGGTGCTG
CTGGCGGGGA TAGAAACCCA TGTTTGCGTG TACCAAACCT GCCGCGATCT ACTCGACCAG
CACTACTCGG TGCACCTTGT CGCCGATGCC GTTTCTTCCC GCAGCGTTGA CAATAAACAG
CTGGGCATCC AGATGATGAC AGCCAAGGGA GCCACTCTTA CCAATGTGGA GTCACTGTTG
TTTGAACTGC AACATGAAGC TCAGGGCGAT ATATTTAAGG CACTGATTAA ATTGATTAAA
TAA
 
Protein sequence
MLKPEECVLV IVDVQGKLAQ IMDNSAKLHQ QLSTLIQGAQ LFEIPILWLE QLPAKLGSTT 
EELKTLLERT GSPIAKQHFS GWYCDEFANA LTQTRRKQVL LAGIETHVCV YQTCRDLLDQ
HYSVHLVADA VSSRSVDNKQ LGIQMMTAKG ATLTNVESLL FELQHEAQGD IFKALIKLIK