Gene Shewana3_3528 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3528 
Symbol 
ID4476128 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp4228053 
End bp4229111 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content50% 
IMG OID639728137 
Productphospho-2-dehydro-3-deoxyheptonate aldolase 
Protein accessionYP_871157 
Protein GI117921965 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0722] 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase 
TIGRFAM ID[TIGR00034] phospho-2-dehydro-3-deoxyheptonate aldolase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000104126 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATTACC AAAATGATGA CGTTCGCATT AATGAAGTCA AAGAGTTACT TCCACCGATT 
GCGATTCTAG AACGATTTCC TGCTTCCGAA AACGCTGCTG CAACTGTGTT TAACGCCCGT
CAAAGTATCC ATAACATTCT CGCTCGCCAA GATGATCGTT TGTTAGTCGT CATTGGTCCT
TGCTCAATCC ATGATCCTAA GGCCGCATTG GAATACGGCC AGCGACTGGT TGCGCTAAGA
GAACGTTATC GAGATCAGCT CGAAGTGGTG ATGCGTGTTT ATTTTGAAAA GCCGCGTACC
ACAGTGGGTT GGAAGGGACT CATCAACGAT CCTTATATGG ATAACAGCTT CAAACTGAAC
GATGGTTTGC GTACCGCGCG TAAACTCTTG GTCGATTTGA ATGACTCAGG CATGCCTACC
GCGGGTGAAT TCCTCGATAT GATCACCCCG CAATATGTGG CGGATATGAT GTGCTGGGGC
GCCATCGGCG CGCGCACCAC AGAATCGCAG GTACACCGCG AGCTGGCCTC GGGGCTGTCT
TGCCCTGTAG GCTTTAAAAA TGGTACCGAT GGCACGATTA AGGTGGCAAT CGATGCCATT
GGCGCCGCGA ATGCGCCGCA CCACTTCTTA TCGGTAACCA AATTTGGCCA TTCGGCGATT
GTGTCGACTA AAGGTAATCC TGATTGCCAT ATCATTCTGC GCGGCGGCCG TGAGCCAAAT
TACAGTGCCA GCCATGTGGC GCAGATCAGC GAACAACTGA AAAAGGCCAA GCTGGTCGAT
AACATAATGA TCGATTTCAG CCATGCCAAC AGCAGCAAAC AATATCAACG CCAAATGGAA
GTCGCGAACG ATGTGGCCGA ACAAATGGCT GCGGGTAATA AGGCGATTTT CGGTGTGATG
GTCGAAAGCC ACTTAGTGGA AGGGCGTCAG GATCTGATTG AAGGTCAAGC GTTATGCTAC
GGTCAGAGCA TCACAGATGC CTGTATTGGT TGGGACGATA CCGAGCGTTT ACTCGCAGTG
TTAAATCAGA GTGTTATCGA ACGTCGTCAG CGGGTTTAA
 
Protein sequence
MYYQNDDVRI NEVKELLPPI AILERFPASE NAAATVFNAR QSIHNILARQ DDRLLVVIGP 
CSIHDPKAAL EYGQRLVALR ERYRDQLEVV MRVYFEKPRT TVGWKGLIND PYMDNSFKLN
DGLRTARKLL VDLNDSGMPT AGEFLDMITP QYVADMMCWG AIGARTTESQ VHRELASGLS
CPVGFKNGTD GTIKVAIDAI GAANAPHHFL SVTKFGHSAI VSTKGNPDCH IILRGGREPN
YSASHVAQIS EQLKKAKLVD NIMIDFSHAN SSKQYQRQME VANDVAEQMA AGNKAIFGVM
VESHLVEGRQ DLIEGQALCY GQSITDACIG WDDTERLLAV LNQSVIERRQ RV