Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_3528 |
Symbol | |
ID | 4476128 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 4228053 |
End bp | 4229111 |
Gene Length | 1059 bp |
Protein Length | 352 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 639728137 |
Product | phospho-2-dehydro-3-deoxyheptonate aldolase |
Protein accession | YP_871157 |
Protein GI | 117921965 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0722] 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase |
TIGRFAM ID | [TIGR00034] phospho-2-dehydro-3-deoxyheptonate aldolase |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0000104126 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTATTACC AAAATGATGA CGTTCGCATT AATGAAGTCA AAGAGTTACT TCCACCGATT GCGATTCTAG AACGATTTCC TGCTTCCGAA AACGCTGCTG CAACTGTGTT TAACGCCCGT CAAAGTATCC ATAACATTCT CGCTCGCCAA GATGATCGTT TGTTAGTCGT CATTGGTCCT TGCTCAATCC ATGATCCTAA GGCCGCATTG GAATACGGCC AGCGACTGGT TGCGCTAAGA GAACGTTATC GAGATCAGCT CGAAGTGGTG ATGCGTGTTT ATTTTGAAAA GCCGCGTACC ACAGTGGGTT GGAAGGGACT CATCAACGAT CCTTATATGG ATAACAGCTT CAAACTGAAC GATGGTTTGC GTACCGCGCG TAAACTCTTG GTCGATTTGA ATGACTCAGG CATGCCTACC GCGGGTGAAT TCCTCGATAT GATCACCCCG CAATATGTGG CGGATATGAT GTGCTGGGGC GCCATCGGCG CGCGCACCAC AGAATCGCAG GTACACCGCG AGCTGGCCTC GGGGCTGTCT TGCCCTGTAG GCTTTAAAAA TGGTACCGAT GGCACGATTA AGGTGGCAAT CGATGCCATT GGCGCCGCGA ATGCGCCGCA CCACTTCTTA TCGGTAACCA AATTTGGCCA TTCGGCGATT GTGTCGACTA AAGGTAATCC TGATTGCCAT ATCATTCTGC GCGGCGGCCG TGAGCCAAAT TACAGTGCCA GCCATGTGGC GCAGATCAGC GAACAACTGA AAAAGGCCAA GCTGGTCGAT AACATAATGA TCGATTTCAG CCATGCCAAC AGCAGCAAAC AATATCAACG CCAAATGGAA GTCGCGAACG ATGTGGCCGA ACAAATGGCT GCGGGTAATA AGGCGATTTT CGGTGTGATG GTCGAAAGCC ACTTAGTGGA AGGGCGTCAG GATCTGATTG AAGGTCAAGC GTTATGCTAC GGTCAGAGCA TCACAGATGC CTGTATTGGT TGGGACGATA CCGAGCGTTT ACTCGCAGTG TTAAATCAGA GTGTTATCGA ACGTCGTCAG CGGGTTTAA
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Protein sequence | MYYQNDDVRI NEVKELLPPI AILERFPASE NAAATVFNAR QSIHNILARQ DDRLLVVIGP CSIHDPKAAL EYGQRLVALR ERYRDQLEVV MRVYFEKPRT TVGWKGLIND PYMDNSFKLN DGLRTARKLL VDLNDSGMPT AGEFLDMITP QYVADMMCWG AIGARTTESQ VHRELASGLS CPVGFKNGTD GTIKVAIDAI GAANAPHHFL SVTKFGHSAI VSTKGNPDCH IILRGGREPN YSASHVAQIS EQLKKAKLVD NIMIDFSHAN SSKQYQRQME VANDVAEQMA AGNKAIFGVM VESHLVEGRQ DLIEGQALCY GQSITDACIG WDDTERLLAV LNQSVIERRQ RV
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