| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_3507 |
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| Symbol | |
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| ID | 4479291 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 4207997 |
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| End bp | 4208716 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639728116 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_871136 |
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| Protein GI | 117921944 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.430968 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGCTC CCATAATTAT CACTGGCGTG GGTAAACGCA TTGGCTACGC CCTCGCGAAA
CACTTGCTTG CCCAAGGGCA CAAGGTGATT GGCACCTATC GCAGCCATTA TCCCAGTATT
GATGAGTTAC AGTCTTTGGG CGCGACCTTA ATCCAATGCG ATTTTTACGA TAATGCGCAG
CTACAAACCC TGATTGAGCA ATTGAGCCAA TATCCCAAAA TACGCGCTAT TATCCATAAC
GCCTCTGACT GGCTGCCAGA CAACAGCCCA AGCCTTGCCG CCCATGAAGT CATGCAGCGG
ATGATGCAGG TGCATGTGAG CGTACCCTAT CAAATGAACT TGGCCTTAGC CTCACAGCTG
CGTGCTGGGG GCGAGGGCGA GATTGGCGCC AGCGATATTA TCCATTTCAC CGATTATGTG
GCCGAAAAGG GCAGTGCCAA GCACATGGCC TACGCGGCCA GCAAGGCGGC GCTGGATAAC
TTAACCTTAT CCTTTGCGGC ACAATTAGCG CCCGAGGTCA AAGTCAATGC GATTGCTCCG
GCGATGATCC TCTTTAATCC AAGCGATGAT GAAGCCTATC GGCAAAAGAC CTTGGCTAAG
GCAATCTTGC CAAAAGAAGC AGGAAATCAG GAGATTATCG CCTTAGTGGA TTATCTCTTG
GCGAGCCGCT ACGTCACTGG TCGCTGCCAC AATGTCGATG GCGGTCGGCA TTTAAAGTAA
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| Protein sequence | MTAPIIITGV GKRIGYALAK HLLAQGHKVI GTYRSHYPSI DELQSLGATL IQCDFYDNAQ
LQTLIEQLSQ YPKIRAIIHN ASDWLPDNSP SLAAHEVMQR MMQVHVSVPY QMNLALASQL
RAGGEGEIGA SDIIHFTDYV AEKGSAKHMA YAASKAALDN LTLSFAAQLA PEVKVNAIAP
AMILFNPSDD EAYRQKTLAK AILPKEAGNQ EIIALVDYLL ASRYVTGRCH NVDGGRHLK
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