Gene Shewana3_3504 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3504 
Symbol 
ID4479288 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp4205751 
End bp4206326 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content50% 
IMG OID639728113 
ProductyecA family protein 
Protein accessionYP_871133 
Protein GI117921941 
COG category[S] Function unknown 
COG ID[COG3079] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR02292] yecA family protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000256627 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGACCC CTCCTTCGTT ACGCATCGAC AGCTTAAAAA TCGCCCTCGA TGCGGCTGAA 
ATTGGTCAGC ATCCCGTGGA AGTACACGGT GCCCTTGTGG GTTTAATCTG CGGTGGCGTA
GAGCAAACTG GTGATCTGTG GATTAAACCT TTATTTGACC TGATGAATGA TGGTCAACCT
TTACCGGCAC CTCTGCATCA ATTGGTGTGT GAGCTATTCC AAGACTCGGT TGCCCGTTTA
GGTGATTTTG AGTTTGGCTT TATGCCGCTG CTTCCTGAAG AGGAAGAGCC GTTAAGTCAA
CGCGTTGAAG CCTTATCCCT GTGGACGCAA AGCTTTTTAA CGGGTATCGC AATTATCCAG
CCCAAGCTGA ATAAAGCCTC GGCCGAAGTG CGTGAAGTGA TTAAAGATCT GGCCGAGATC
GCTCAGGTCG AATTCGATGT GGCTGACGAT GAAGAATCGG AAACGGCTTA TATCGAGTTA
CTGGAGTTTG TGCGTATTGC CGCCATTATG TGTTACTCCG AGTTTGGCCC CGAGCCGAGC
CACGGTGAAG GCGACGATCC TGCGGTGATC CATTAA
 
Protein sequence
MATPPSLRID SLKIALDAAE IGQHPVEVHG ALVGLICGGV EQTGDLWIKP LFDLMNDGQP 
LPAPLHQLVC ELFQDSVARL GDFEFGFMPL LPEEEEPLSQ RVEALSLWTQ SFLTGIAIIQ
PKLNKASAEV REVIKDLAEI AQVEFDVADD EESETAYIEL LEFVRIAAIM CYSEFGPEPS
HGEGDDPAVI H