| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_3488 |
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| Symbol | |
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| ID | 4479272 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 4182368 |
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| End bp | 4183276 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 639728097 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_871117 |
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| Protein GI | 117921925 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.464189 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGTCAGTA TTGAGCAAAT GGCTTTAGTG CTGGACGCGC TACCCGATCC GGCGTTTATC
CTGTCCCAAA GCGGCCGCTA TGTTGCGGTG TTTGGCGGTA AAGATGCGCG TTATTACCAC
GACGGCAGTG GATTAGTCGG CCTTTACCTG AGCGATGTAC TCAACGACGA AAAAACCACT
TACTACCTCG GTATTATTCA GCAAGCCTTA GATAGCCGTA AATTATTGAT TGAGGAATAT
GAGCTCAGTA ATAAGGATGT CAAAGGCTTA CCCGATGAAG GACCATCGCA ACCCATCTGG
TTTGAGGGGC GCATTCAGGC GTTAGATTTT CTGGTGAATA ACGAACCCGT CGTCCTCTGG
GTCGCCAGTA ATATTTCCAA GCGCCATAAA CTGGAATTAC AACTGCGACA GTTAAGCGAT
ACCGACCAAT TGACAGGGCT CTATAACCGC CGCCGCTTAG ACCGTGATTT ACAACTACTC
TTCGACACCT TTAGCCGCCA CCGTATTCCG GCCTCGATCT TAGTCTTAGA TCTGGACCAC
CTAAAGCGGA TCAACGATCA ACTGGGCCAC CAAGCGGGCG ATCGCGTTAT CATGGCAGTC
GCCGACACCT GCCAACAACA ATTTCGCAAA ACCGACAGCG CCTACCGTTT TGGTGGCGAT
GAGTTTGTGA TTGCCCTGCC CGGAGTTGAC CATGACCAAG CCATAGTGTT TGCCGAATAC
CTCTGTGACT GCTGCTTTAA GGCATTGCAG CAACTCTCTG TAAAGGGATT ATTTGCCACC
GTCAGCATAG GTGTCGCCAG CATAGAAGCG GGCGATAAAT CCTATGAAGA CACCCTAAAA
CGCGCCGATG CAGCGCTCTA TCAAGCCAAG CGGGATGGCA AAAACCGCGT TATCGCCAAT
AGTGCTTGA
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| Protein sequence | MVSIEQMALV LDALPDPAFI LSQSGRYVAV FGGKDARYYH DGSGLVGLYL SDVLNDEKTT
YYLGIIQQAL DSRKLLIEEY ELSNKDVKGL PDEGPSQPIW FEGRIQALDF LVNNEPVVLW
VASNISKRHK LELQLRQLSD TDQLTGLYNR RRLDRDLQLL FDTFSRHRIP ASILVLDLDH
LKRINDQLGH QAGDRVIMAV ADTCQQQFRK TDSAYRFGGD EFVIALPGVD HDQAIVFAEY
LCDCCFKALQ QLSVKGLFAT VSIGVASIEA GDKSYEDTLK RADAALYQAK RDGKNRVIAN
SA
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