| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_3478 |
|---|
| Symbol | |
|---|
| ID | 4479262 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. ANA-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008577 |
|---|
| Strand | + |
|---|
| Start bp | 4172215 |
|---|
| End bp | 4172691 |
|---|
| Gene Length | 477 bp |
|---|
| Protein Length | 158 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 639728087 |
|---|
| Product | blue (type1) copper domain-containing protein |
|---|
| Protein accession | YP_871107 |
|---|
| Protein GI | 117921915 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG3241] Azurin |
|---|
| TIGRFAM ID | [TIGR02695] azurin |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGCGA AAAGCACCAC TTTACGTAAT ATGACTAGCG CTAGCTTACT CGGCCTAGGA
TTATTCGTCG CCAGCCAAGC GAGTGCTAAC GAATGTGAAC TCAAGATTGC TGCGACTGAC
GCTATGCAAT TTGACACTAA AGAGCTGTCT GTTCCTGCAA CGTGTAAGGA AGTGACCCTC
ACACTAACGC ACACTGGCAC TCTGCCAAAA GCAGCTATGG GCCACAACTG GGTATTAACT
AAAGCCGCCG ATATGTCTGC CGTTGCGACC GATGGTATGG GCGCTGGCGC CGATGCTGCT
TACGTTAAAG CCGGTGATAC ACGTGTTATC GCACACACTG GTTTAGTGGG TGGCGGTGAA
TCAACTTCTG TGACCTTTAG CACCGCAGGC ATGAGCGCGA CTGAAGCTTA CCAGTTCTTC
TGCAGCTTCC CAGGCCACTG GGCGATTATG CAAGGTAGCT TTAAAATTCA AGGCTAA
|
|---|
| Protein sequence | MKAKSTTLRN MTSASLLGLG LFVASQASAN ECELKIAATD AMQFDTKELS VPATCKEVTL
TLTHTGTLPK AAMGHNWVLT KAADMSAVAT DGMGAGADAA YVKAGDTRVI AHTGLVGGGE
STSVTFSTAG MSATEAYQFF CSFPGHWAIM QGSFKIQG
|
|---|
| |