| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_3468 |
|---|
| Symbol | |
|---|
| ID | 4476811 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. ANA-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008577 |
|---|
| Strand | + |
|---|
| Start bp | 4158564 |
|---|
| End bp | 4159226 |
|---|
| Gene Length | 663 bp |
|---|
| Protein Length | 220 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 639728077 |
|---|
| Product | butyryl-CoA:acetate CoA transferase |
|---|
| Protein accession | YP_871097 |
|---|
| Protein GI | 117921905 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG2057] Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit |
|---|
| TIGRFAM ID | [TIGR02428] 3-oxoacid CoA-transferase, B subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCACTTT CAAGAGAACA ACTCGCCCAG CGCGTCGCCC AAGAACTCAA AGATGGCTAT
TACGTGAATC TCGGCATTGG TATCCCCACA CTGGTGGCCA ACTATATTCC CGAAGGCATT
GAAGTGATGC TGCAATCCGA AAATGGCCTG TTAGGGATGG GGCCTTTTCC GACCATGGAA
GAGGTCGATG CCGACTTAAT CAATGCAGGA AAACAAACCG TGACTATGGC AAGGGGCGCC
GCCCTCTTCG ACTCGGCCGA GTCCTTTGCG ATGATCCGCG GCGGCCATGT GGATCTCACC
GTATTAGGCG CCTTTGAGGT CGACACTCAG GGCAATATTG CCTCCTATAT GATCCCTGGG
AAACTGATTA AGGGCATGGG CGGCGCCATG GATCTTGTCG CCGGCGCCGA CAATATTATT
GTGACCATGA CCCACGCCTC AAAGCACGGT GAATCCAAGC TATTAACCGA GTGCACCCTG
CCGCTAACGG GTAAGGGCTG TATCAAAAAA GTGCTGACAG ACTTGGCCTT TATCGAAATC
AAAGAAGGCA AGTTTCATCT ACTCGAACGT GCGCCCGGCG TGAGTGTCGA GGAGATTATC
AAGCTCACCG CAGGCGAATT GGTGGTACCT GAGCATGTCC CCGAGATGAT GTTTAACGAA
TAA
|
|---|
| Protein sequence | MALSREQLAQ RVAQELKDGY YVNLGIGIPT LVANYIPEGI EVMLQSENGL LGMGPFPTME
EVDADLINAG KQTVTMARGA ALFDSAESFA MIRGGHVDLT VLGAFEVDTQ GNIASYMIPG
KLIKGMGGAM DLVAGADNII VTMTHASKHG ESKLLTECTL PLTGKGCIKK VLTDLAFIEI
KEGKFHLLER APGVSVEEII KLTAGELVVP EHVPEMMFNE
|
|---|
| |