| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_3458 |
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| Symbol | |
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| ID | 4476801 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 4143817 |
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| End bp | 4146093 |
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| Gene Length | 2277 bp |
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| Protein Length | 758 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 639728067 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_871087 |
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| Protein GI | 117921895 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.485472 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.120897 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACAGA ATACTATCAA AATGAGTTGC ATTGCTTTAG CTATCTCATC TGCATTGGCA
GCACAATATG CTGTTGCCGA GGATGAAAAT AGCACCGGGG AGAAGCAAGC TACCTTAGAA
CGCATTGAAG TCACCGCTCG TAAGTCCATT GAGAGCCTGC AAAACGTACC AGTTGCAGTG
ACCTCGGTCA GTGCTGACGA TTTGGCGGAA AATGGCATCA GTGTGATGAC TGAAATCCAG
CAATTTTCAC CCAACACTAC GCTGCAATCC AGTCGCGGCA CTAACTCTAC CCTCACGGCC
TTTATTCGCG GTGTCGGCCA GGAAGATCCG CTCTGGGGCT ATGAGCCCGG CGTCGGTATC
TATATCGACG ATGTGTATAT CGCCCGCCCA CAGGGCGCGG TGCTCGATAT CCTCGATGTG
CAACGTATCG AAGTACTGCG TGGCCCACAG GGCACCCTCT ATGGTAAAAA TACCATCGGC
GGCGCGGTCA AATACGTGAC CAAGAAGATG AGCGGTGACG CTGAGTTAAA CCTCAATGCC
ACCATCGGCA GCTACAACCA GCAAGACTAC AAGATAGCAG GTCAATTACC TTTAATTGAT
AACAAGCTGT ATATTGGTGG CGCCTTCGCA AGCTTAAATC GCGATGGTTA TGGTGATTTC
ATCACCTCAG CATTACCAGA CCAAGACACT GAAAACTATA ACAAAGATGT TATGGCAGGG
CGTGTGAGCT TAGAATACAC GCCAACCGAC GATCTGTTTA TGCGCCTCAA CTACGACAAA
ACCACAGATG AGTCGAATTC AAAGGGGGGC TACCGCATGC TCCCCAGTGT CCTGACCGAT
GCCCCTGTAC CAGACAGCAA ATACGACTCT TACACCAGTA TGCCAACCTG GAACAAAGTG
GAAACCGAAG GTTGGGGGCT GACCATTGAA TACGGCTTGA ACGATGATTG GACACTGAAA
TCCGTGACCT CATCCCGCGA GAGCTATTCG CCCACCAACA TCGACTTTGA CAACACCAGC
CTGCGTATTT TGGACGTTCC AGCCATCTAC GATGACGAAC AATTTAGTCA GGAATTCCAA
GCTAACTACG ACGGCGATAA CTTGAAACTC GTCTCAGGCC TTTATTACTT TAAAGGCGAT
TCCTGCGGGA TGTTCGATTC CATCCTGTAT GAATATTACA AAGCCTACGG TGGTCTCACT
CGTGAAGTTC GTGGTTGCAA CAACAGTGAA AGCTATGCCG CCTACGCTCA GGGCTCTTAC
GACATCACTG ATAAATTGTC GATGACCGCA GGTTTGCGTT ATACCCGCGA AACGAAGGAT
GCCACTGTCT ATAACGGCAT CATGTTTACG ACGCTTTATC CCGAAACTGG CTGGATCCCA
GGATATGTTC GCGATGAAGA TGCCATCAAC GCCAGTATTC CTAAGGTGTT AGATGATGAA
GAAACCTGGT CGAAACTCAA TCCACGCTTA GGTTTAGAGT ACCAACTCAG CGACGATATG
ATGCTCTTTA CCAGCTATTC ACAGGGCTTC AAGTCGGGCA CCTTTAACCC AAGGGCAACG
GGTCCAGAAC CCGCAGTAGA CCCAGAAGTC GTTGATTCCT ATGAGCTGGG TATGAAGAGT
GAATGGTTTG ACAGGCTGCG AGTTAACGCA ACCGCCTTCT ACTTAGACCA TAAAGACAGA
CAGTTCGTGA CCGTATTACC CGGTGAAAAC GCGTCCGATC TTAACCAACG TCTAGGCAAC
ATTGGTAAAT CGACCGCCAC GGGTCTAGAA CTCGAAGTGG AATACGCCGC GACTGAGTCA
TTAAATCTGT TCGCGACTCT GGGCTTAATC GATGCCAGCT TCGAGGAAGT AATCTCCTAC
GATAGCGATG GAAACCGCAT CGATATCAGC GACACTTACA CTATCACCAA CACCCCAGAT
ACCACGGCAA ACGTTGGATT TAGCTACAAT ATCGACACGG ATATCGGCAG CTTTGTGGCC
AACGGTAACT ACTACTATCG CAGCGACTAC GACTTAGCCG TAGTAAATAA CCTGCTGAGC
CAAGACGGTT ATGGCCTGCT AAACCTCGGC TTGAACTGGT ATAGCAACGA CGGTCACTGG
CAAGCGGGTC TGCATTGGAA AAACGTCACT AACGAAGAAT ATCTGGTCGG TAACTACGCC
TTCGTCACCC CAGATGGTAA TGGCGGATAT ATTCCAGGTT TAGGCGGTGA CAATACATTA
ATTGGTTATT ATGGCGATCC AGAGACTATC TCTCTCACCG TTGGCTATAA TTTCTAG
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| Protein sequence | MKQNTIKMSC IALAISSALA AQYAVAEDEN STGEKQATLE RIEVTARKSI ESLQNVPVAV
TSVSADDLAE NGISVMTEIQ QFSPNTTLQS SRGTNSTLTA FIRGVGQEDP LWGYEPGVGI
YIDDVYIARP QGAVLDILDV QRIEVLRGPQ GTLYGKNTIG GAVKYVTKKM SGDAELNLNA
TIGSYNQQDY KIAGQLPLID NKLYIGGAFA SLNRDGYGDF ITSALPDQDT ENYNKDVMAG
RVSLEYTPTD DLFMRLNYDK TTDESNSKGG YRMLPSVLTD APVPDSKYDS YTSMPTWNKV
ETEGWGLTIE YGLNDDWTLK SVTSSRESYS PTNIDFDNTS LRILDVPAIY DDEQFSQEFQ
ANYDGDNLKL VSGLYYFKGD SCGMFDSILY EYYKAYGGLT REVRGCNNSE SYAAYAQGSY
DITDKLSMTA GLRYTRETKD ATVYNGIMFT TLYPETGWIP GYVRDEDAIN ASIPKVLDDE
ETWSKLNPRL GLEYQLSDDM MLFTSYSQGF KSGTFNPRAT GPEPAVDPEV VDSYELGMKS
EWFDRLRVNA TAFYLDHKDR QFVTVLPGEN ASDLNQRLGN IGKSTATGLE LEVEYAATES
LNLFATLGLI DASFEEVISY DSDGNRIDIS DTYTITNTPD TTANVGFSYN IDTDIGSFVA
NGNYYYRSDY DLAVVNNLLS QDGYGLLNLG LNWYSNDGHW QAGLHWKNVT NEEYLVGNYA
FVTPDGNGGY IPGLGGDNTL IGYYGDPETI SLTVGYNF
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