Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_3447 |
Symbol | |
ID | 4476790 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 4129854 |
End bp | 4130915 |
Gene Length | 1062 bp |
Protein Length | 353 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 639728056 |
Product | 16S rRNA m(2)G 1207 methyltransferase |
Protein accession | YP_871076 |
Protein GI | 117921884 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG2813] 16S RNA G1207 methylase RsmC |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.00223061 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGCCCGCAC TTATTTTTTA CGGTAGCCAT GCAGTGTTAA CGAATCCATC GCAAGTCATT ATCCGCAATC AGGAAACCCT GAGCCAACAT AGAGTCTTAG TGCTAAACCA TGAGGCAGAC TCATTGCCCA AAGCACTGCT CGATGTCGCC CAGTCCGTCG ATGCCCTCGC CTTGGATTAT CACCATTACC TGCATTTAGC GCCGCAGGCT AATGCCAAAC TGCGCTGCTA TTTTGGCCAT CAACTGCCCC ACCAGGATAA GTACGACACT GTAATTGTGT ACTTTCCTAA GGCTAAGCCG TTAGCCCCTT ACTTGTTTAA TCTGGCCGCT CAGCATTTAG TAGCAGATGG TCAACTCTTA GTCGTGGGTG AGAACAAAGG CGGGGTTAAA TCCTTAGTCA AACTGTTGCC GAAATACTTT GCCACCGGCG TCAAACTCGA TAACGCGCGC CATTGCCTAC TCTTCGGCAG CAGCCTAATC GATACTGCAC CCGAGATTAA ACTCAGCGAT TGGACTAGCC AGTATCAACT CTCCACTCCG CAGGGCAATA TCACCATCTG CAACTTAGTC GGCGTGTTCA GCGAGAAGCA TTTAGACCAA GGCACAGAGT TATTACTGTC GCATCTACCA ACGCTCTCTG GGCGAGTACT GGATTTTGGC TGCGGCGCCG GTGTGATTGC CGCTGCGCTG TTAAAGGCAC AACCGACACT GTCGCTAGAA TGTATTGATA TCAATGCCAT GGCGCTGGCC TCCTGCGAAC TTACGCTGGC GGCAAACGGC ATGACGGCCA AGGTCTATCC CTCCGATGGA CTGGCGCAAA CCAGTGGAAA ATTCGACGGT ATTATCTCCA ATCCCCCGTT CCACGATGGC CTTGCCAGCA CGACCAGCAT TGCCCAAAGA TTTGTCGCCG ATAGCGCCAA GCAATTACAA TCTAAAGGGA TTTGGCAAAT CGTCACTAAC CGCCACCTAC CCTATTCGGA CACCATCGCC GCCGAGTTCG GCCAATTAAC CGTGCCAGCA GAGAACAACA AGTACAAACT CTATTCCTTC CAACAGGCCT AA
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Protein sequence | MPALIFYGSH AVLTNPSQVI IRNQETLSQH RVLVLNHEAD SLPKALLDVA QSVDALALDY HHYLHLAPQA NAKLRCYFGH QLPHQDKYDT VIVYFPKAKP LAPYLFNLAA QHLVADGQLL VVGENKGGVK SLVKLLPKYF ATGVKLDNAR HCLLFGSSLI DTAPEIKLSD WTSQYQLSTP QGNITICNLV GVFSEKHLDQ GTELLLSHLP TLSGRVLDFG CGAGVIAAAL LKAQPTLSLE CIDINAMALA SCELTLAANG MTAKVYPSDG LAQTSGKFDG IISNPPFHDG LASTTSIAQR FVADSAKQLQ SKGIWQIVTN RHLPYSDTIA AEFGQLTVPA ENNKYKLYSF QQA
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