Gene Shewana3_3446 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3446 
Symbol 
ID4476789 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp4128304 
End bp4129698 
Gene Length1395 bp 
Protein Length464 aa 
Translation table11 
GC content51% 
IMG OID639728055 
Productalkaline phosphatase 
Protein accessionYP_871075 
Protein GI117921883 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1785] Alkaline phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.00260506 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAGTTTCA CCAAAGCGCC ACTGTTATTG CTTGGTATGA GTTTATGGCT CTCCAACTCT 
GCATTGGCAG TCGAAGCGGG AGCGAATGAG ACTGGCCCAG TAAAAGCCCC CTCACGCCCG
AAAAATATTG TGATCATGAT TGGCGACGGC ATGGGGCCTT CCTATACCAG CGCCTATCGT
TATTACAAGG ACAATCCAGA TACCGAAGAA GTCGAACAAA CCGTCTTCGA CCGCTTATTG
GTTGGCATGG CGAGCACTTA TCCCGCCAGC GTCAGTGGTT ATGTCACCGA CTCGGCCGCC
GCCGCGACTG CCCTCGCGAC AGGAGTCAAA TCCTATAACG GCGCCATCTC GGTCGATACC
CAAAAACAGC CACTACCTAC CATTTTTGAA AAGGCCAAAA CCTTAGGCTT GAGCACGGGT
GTGGCGGTCA CGTCGCAAAT CAACCATGCC ACGCCAGCGG CCTTTTTATC CCATAACGAG
AGCCGTAAAA ACTACGACGC ACTGGCATTA AGTTATCTTG AAACCAACGC CGATGTGTTT
TTAGGTGGCG GGCAAAAGTA CTTTCCTCCA GAGCTGTTAG CCCAGTTCAC CGCCAAGGGT
TATCAACACA TTACCCGCTT TGACGATCTG GCCAGCATTA CCCAGCCAAA GGTCTTGGGT
TTGTTTGCCG AGGTGCAACT GCCTTGGGCT ATTGATGAAA AAGATGCTAA AAAACTCAGC
ACCTTGACTC AAAAAGCCCT CAGTTTACTG TCGCAAAATG AGCAAGGCTT TGTGCTGCTG
GTCGAAGGTA GCCTTATCGA CTGGGCGGGA CACAACAATG ATATCGCCGC CGCCATGGGC
GAAATGGATG AATTTGCCAA TGCAATTGAA GTCGTCGAGC AATTCGTACG CCAAAACCCT
GATACCTTAA TGGTGATCAC CGCCGACCAT AATACTGGCG GGTTATCGAT TGGTGCCGAT
GGCAACTACA ACTGGAATCC AGAGATCCTA CGTAATATCT CGGCAAGCTC AGATACCTTA
GCTCAAGCCG CTCTTGGCGG TGATACTTGG CAAGCAGACC TATCCCGCGG GCTAGGCTTT
GAATTGACCG AAGAAGAAGT GACTAAGTTA AATGTTGCCA GAATGCAGGG CTTAGAAACC
ATGGCCGTTG CGATTCGCCA TGTGATTGAT AAACGTACAG ATACGGGTTG GACAACCGGC
GGCCACACGG GGACTGATGT GCAAGTTTTT GCCGCAGGCC CAGCCTCTGA GTTGTTTAAC
GGTCATCAAG ACAACACAGA TATCGCCAAT AAGATTTTTA GCCTGTTACC TAAGCCTAAA
AAGCCAAAAG CCACCGCACA GGTATCGACT CCCGCTCCAG CACCAGAACT AGCACCAGTG
CAGTCTCAGA GCTAA
 
Protein sequence
MSFTKAPLLL LGMSLWLSNS ALAVEAGANE TGPVKAPSRP KNIVIMIGDG MGPSYTSAYR 
YYKDNPDTEE VEQTVFDRLL VGMASTYPAS VSGYVTDSAA AATALATGVK SYNGAISVDT
QKQPLPTIFE KAKTLGLSTG VAVTSQINHA TPAAFLSHNE SRKNYDALAL SYLETNADVF
LGGGQKYFPP ELLAQFTAKG YQHITRFDDL ASITQPKVLG LFAEVQLPWA IDEKDAKKLS
TLTQKALSLL SQNEQGFVLL VEGSLIDWAG HNNDIAAAMG EMDEFANAIE VVEQFVRQNP
DTLMVITADH NTGGLSIGAD GNYNWNPEIL RNISASSDTL AQAALGGDTW QADLSRGLGF
ELTEEEVTKL NVARMQGLET MAVAIRHVID KRTDTGWTTG GHTGTDVQVF AAGPASELFN
GHQDNTDIAN KIFSLLPKPK KPKATAQVST PAPAPELAPV QSQS