Gene Shewana3_3443 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3443 
Symbol 
ID4476786 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp4125663 
End bp4126436 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content49% 
IMG OID639728052 
Productendonuclease I 
Protein accessionYP_871072 
Protein GI117921880 
COG category[L] Replication, recombination and repair 
COG ID[COG2356] Endonuclease I 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000111641 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.00909149 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGAACAACG TCAAGATAGC CTTAAGGTCT CGGCAAGCCT TGCTGTGCCT ATTCAGTTGG 
CTGGCGGTTT CGGCATCAGT CCACGCCTCT CCTTCACACC CCAATAGTTT TAGCCAAGCC
AAGGTCTTGT CCCAATCCTT ATATCAAGGC AGTCGCCAAG GCACCCTGCC CGCGGTCAGT
TTTTATTGTG GCTGTGATAT CCAAATAAAG GGCAAATCCT GGAAGCCAGA TCTCAACAGC
TGCGGCTATC AAGTGCGTAA ACAAGAGACC CGCGCCAACC GTATCGAATG GGAACATATA
GTTCCAGCAT GGGAATTTGG CCATCAATTA CAATGCTGGC AAAAGGGCGG CCGTAAAAAC
TGCGCCGATA ACAGTCAAGA ATTCAATAAA ATGGAAGCGG ACATGCACAA TCTGGTGCCC
GCGATTGGTG AAGTGAACGG CGATCGCAGC AACTTCCGTT TTAGCCAATG GAACGGTAAG
GCCGACCAAT ATGGTCAATG CACTATGGTC ATCGACTTTA AGAATCGCCA AGCACAGCCG
CCCGTCAATG CGCGTGGCAA GATTGCCCGT ACTTACCTGT ATATGCAGCA AACCTACGGC
CTTAAAATAG CCTCGCAGCA ATTAAAATTG TTCAAAGCAT GGGATAAAAG CTATCCAGTT
GATACTATTG AATGCAAACG CGATAACGCC ATAGCGCAGA TCCAAGGTAA TCATAATCCC
TTTGTGCAGA ATGCCTGCAA TGCGCCGCCA CTGCGCCAAC AATTAGCCGA ATAA
 
Protein sequence
MNNVKIALRS RQALLCLFSW LAVSASVHAS PSHPNSFSQA KVLSQSLYQG SRQGTLPAVS 
FYCGCDIQIK GKSWKPDLNS CGYQVRKQET RANRIEWEHI VPAWEFGHQL QCWQKGGRKN
CADNSQEFNK MEADMHNLVP AIGEVNGDRS NFRFSQWNGK ADQYGQCTMV IDFKNRQAQP
PVNARGKIAR TYLYMQQTYG LKIASQQLKL FKAWDKSYPV DTIECKRDNA IAQIQGNHNP
FVQNACNAPP LRQQLAE