Gene Shewana3_3442 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3442 
Symbol 
ID4476785 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp4124928 
End bp4125533 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content52% 
IMG OID639728051 
Producthypothetical protein 
Protein accessionYP_871071 
Protein GI117921879 
COG category[S] Function unknown 
COG ID[COG3091] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000887757 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.148419 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTAACC AGAGATCCCT ACTTAATAGC CTGCGCCGTA AAGCCATCTC ATCCACGAGT 
ATCACCTCAG CAACGGCGGC TAACTCGGCC ACGCCACAAC GCCAGCCAAA GCCGCTGACA
CCCCTGCAGC AACAAATTCT GGTACGCATC GAAGACTGTT ACCAGCAGGC GGAAATCTAC
TTTAAGCGTC CATTTGCGCG GCCGCTGACC CAATTTACTC TGCGGGGACG GAGTGCGGGC
ACGGCCCATT TACAACAGAA TCGCCTGCGA TTTAATCCCG TATTGCTCAG GGAAAATAGC
GAAGCCTTTT TAGCCGAAGT AGTGCCCCAC GAAATCAGCC ATTTGCTCTG TTTCCAACTG
TTTGGCAAAA CCAAGCCCCA TGGCCGCGAG TGGCAATCCA TCATGCTCAA GCTGTTTAAG
GTGAGCCCCA ATACCACCCA CAGTTTCGAT ACTCAATCGG TTAAAGGGAA AGACTTTGAG
TACCGCTGTG CCTGCGGTCC GGTTAAGCTG AGCATCCGTC GCCATAATAA AGTGTTACGT
GGTGAAACCC GTTATCTATG CAAACGCTGC CATACCCACC TCACCTTTAT CGAAGCCGCC
GAATAA
 
Protein sequence
MFNQRSLLNS LRRKAISSTS ITSATAANSA TPQRQPKPLT PLQQQILVRI EDCYQQAEIY 
FKRPFARPLT QFTLRGRSAG TAHLQQNRLR FNPVLLRENS EAFLAEVVPH EISHLLCFQL
FGKTKPHGRE WQSIMLKLFK VSPNTTHSFD TQSVKGKDFE YRCACGPVKL SIRRHNKVLR
GETRYLCKRC HTHLTFIEAA E