Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_3435 |
Symbol | |
ID | 4476778 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 4111011 |
End bp | 4111898 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 639728044 |
Product | LysR family transcriptional regulator |
Protein accession | YP_871064 |
Protein GI | 117921872 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0107817 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATATCC CAATCAAGAC CTTGCAATGT TTTCTGACCT TAGTCGAAAC GGAAAACTTC ACCCGTGCCG CGGAAAAATG CTTTATCACC CAGCCCACGC TGAGCAAGAT CATCCAAAGG CTCGAAGAGA GTTTAGGCGA GACGCTGCTT ATCCGTAACA ATCAGAAAGT CGAGCTGACC CAAGCAGGGC AGCTGTTTGA ACACAGCGCG CGGGAAATCC TCGGGCAATG GCATAGATTG CAGGAGGACA TGAGCAACTT AAGCGGACTT AAAACAGGAC GGTTAAGATT AGGCGTCTGC CCTATGATGA GCAGTCTAAT TATCGGGCTA CTGACCAGTT ACCGAAAACG TTATCCCGGC GTTGAGCTGC AAATGTATGA ATACGGCGGA TTTGGTTGTG AACAGGCGCT GCTGAATAAC AGCTTAGACA TCGCCTTTAC CGCACTGCCA ACCACCCATG AGACCGAGCT GGTGAATCAA CCGCTCACCA AGTATCCCCT GCTCGCTTGT TTGCCCGATG GGCATCCGCT CGCCAGTCAA TCTCACCTCA GCTGGCAGGA TTTTGAGCCC TATCCCTTTA TTCTCTATAA CGAAGATTTT TCCTTGGCGA AGCTAATAAA TCGCCTGAGT CGTAAGGCGG GAGTGCAACT CAATATCGCG TTTCGAAGCG GCCAATGGGA CTTTCTCGCC GCTATGGTCG AGGCCGATAT GGGCCTAGCG ATTTTACCCG AACCGATTTG CCAAAAACTC AGCACCAGCA AGTTAGTGTT TAGACCTATG CAACCGGCGA TGACCTGGGA TTTAGCCCTC ATTTGGCGGC AAAATCTACC TTTAACCCCT GCGGCCAATG CGTTACTGGA ACTGAGTAAA CAGAAAGCAC TGCGTTAA
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Protein sequence | MNIPIKTLQC FLTLVETENF TRAAEKCFIT QPTLSKIIQR LEESLGETLL IRNNQKVELT QAGQLFEHSA REILGQWHRL QEDMSNLSGL KTGRLRLGVC PMMSSLIIGL LTSYRKRYPG VELQMYEYGG FGCEQALLNN SLDIAFTALP TTHETELVNQ PLTKYPLLAC LPDGHPLASQ SHLSWQDFEP YPFILYNEDF SLAKLINRLS RKAGVQLNIA FRSGQWDFLA AMVEADMGLA ILPEPICQKL STSKLVFRPM QPAMTWDLAL IWRQNLPLTP AANALLELSK QKALR
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