Gene Shewana3_3428 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3428 
Symbol 
ID4476771 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp4103707 
End bp4105332 
Gene Length1626 bp 
Protein Length541 aa 
Translation table11 
GC content53% 
IMG OID639728037 
Producthypothetical protein 
Protein accessionYP_871057 
Protein GI117921865 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAATC TAAGACCAGC TCTAAGCAAT AAGGAACACG GCGCGGTACT GCTTATCGTC 
TTAGTCTTCA GTCTATTAGC GAGTTTGCTG GTGGTCACGT CCCTCAGGGA TAACCTAGTG
CAAGAGCGAC TGAGCGGTAA CTTTCAAAAG CAAGTCAATG CGCAGCTACT CGCCGAACAG
GGGATGCATG AGAGTTACAA CCAACTCAAG ACTCAGCTGC AGCGCGCGCC CAATCAAGGC
CTGCAAACCC TTTATGAGCA ACTCCCCGCC GAAGCCGATG GCAGCCTCGA AGGCAGCAGC
TATGCCCTCG AAAACGGCCA AATCGCCGGG GCCGATCTTA GCCTCGACAG TCGTGGCAAT
CATTTAGAGG GTGAGGCCAA ACTCAACGCC CAGTTCACAC TGCAGGGCAG TCACGGAAAT
ACGATTTTCA ATGATGCGAT TGTGTCCTGC GAAAGCTTGA ATTTAACTGG CAGCAGTAGC
ATCGATGGCT ACGATTCCCG TAAAGGCGCC TATGGCGATA GCATCAGTAA TGGCCAAGGT
GGCAGTGAGC TTAATCAACA TGGCAAAGGC AATGTCACGA CCATTGAGCC CAATGCCAAT
ATTACGCTCA CGGGCAACGC ACCAATTTAC GGCGATGTTA GCGCCACGGG CAGCGTCACC
CTCACCGGCT CGTCGGATAT CCACGGCAGC ATTCAAGCCA ATAATGATGT CACCCTAGGC
ACAGGGACCA TAGGCGGGAA TGTCGCGGCG GGCAATAACT TTAACTTGGC CAATAGCGGC
ACGGTGGCAG GTTCGGTCAA AGCCAATAAT AATGCCGCCA CGGCGCCCAA AGCCCAAGTG
AATGGCACAC TGCAATATGG CGGCGACGGT AACTTTCATC AGGACAGCCA GATTGGCAAC
TTAGTCAACG CACGCCCTAA TGTGCCGCCC GTGCCGACAA AATCCTGTGA CCCATTAGAT
ATTGGCGCTG TGATGGGCGG CTTTAAGATG CCAAATAACG GCGCGCGCAG GATTGATTCA
AACGCCAATG TCACTATCAC GCCATCGGGG TCGAGTAAGA CCGAACTCGG CTGGAAAGGT
GATTATTTCC CGAGCCTTAC CCCCACGTCA GAAAACATCT TCGGTAGTGA CACCCCAGTA
TTTAACCTCG ACAGCTTAGT CATGAGCGCC GATGGCGTGC TCAATATCAG TGGCGGCGAT
GTCACCCTGA TAGTCAATGG TGACTTTAAG ATGAGTGGCT CGAATCAGCT AAATATTGCC
CCGGGCTCGA GCCTTACGCT GTTTGTGGGC GGTGAAGTCG CCTTTACGGC GGGAACAAAC
AACGGTAACA ACATTAAGGG ACAAACCCTA ACCGACAGCA ACAAGCCGCC ACTGTCTATT
TTTTCTGGCT CGGATAAGGA TGTCACCGTC AGCGGTAATG TGCCGATTTA TGCCGCGCTC
TACGCCCCCA AATCTAAGGT TAATCTTCCC GGCGGCCCAG AGATTTTCGG CTCGGTGAGG
GGCAAATCCA TCACAGCCAC CGGAAATGGA AAAATCCATT ATGACAATGC CTTAGGCGCT
GCCGACTTAG GCGAAGGTAA TGCTAATCCC GCGGTCATCC TGCTCAAGCA ATGGCAATAT
TTGTAG
 
Protein sequence
MDNLRPALSN KEHGAVLLIV LVFSLLASLL VVTSLRDNLV QERLSGNFQK QVNAQLLAEQ 
GMHESYNQLK TQLQRAPNQG LQTLYEQLPA EADGSLEGSS YALENGQIAG ADLSLDSRGN
HLEGEAKLNA QFTLQGSHGN TIFNDAIVSC ESLNLTGSSS IDGYDSRKGA YGDSISNGQG
GSELNQHGKG NVTTIEPNAN ITLTGNAPIY GDVSATGSVT LTGSSDIHGS IQANNDVTLG
TGTIGGNVAA GNNFNLANSG TVAGSVKANN NAATAPKAQV NGTLQYGGDG NFHQDSQIGN
LVNARPNVPP VPTKSCDPLD IGAVMGGFKM PNNGARRIDS NANVTITPSG SSKTELGWKG
DYFPSLTPTS ENIFGSDTPV FNLDSLVMSA DGVLNISGGD VTLIVNGDFK MSGSNQLNIA
PGSSLTLFVG GEVAFTAGTN NGNNIKGQTL TDSNKPPLSI FSGSDKDVTV SGNVPIYAAL
YAPKSKVNLP GGPEIFGSVR GKSITATGNG KIHYDNALGA ADLGEGNANP AVILLKQWQY
L