Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_3406 |
Symbol | |
ID | 4476749 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 4074921 |
End bp | 4076228 |
Gene Length | 1308 bp |
Protein Length | 435 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 639728015 |
Product | poly(A) polymerase |
Protein accession | YP_871035 |
Protein GI | 117921843 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0617] tRNA nucleotidyltransferase/poly(A) polymerase |
TIGRFAM ID | [TIGR01942] poly(A) polymerase |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000031653 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCTCGGG ATGCGCATTC GATCTCCCGT AAGCAGATCA GCGAAAACGC ACTTAAAGTA TTATACCGAT TGAATAAATC AGGTTTCCAG GCCTATTTAG TTGGTGGGGG CGTACGGGAT TTACTCCTCG GACTCGAACC GAAAGACTTC GACGTGGTCA CCAATGCGAC GCCGGAAGAG ATTAAAAAGC TGTTTCGCAA TTGCCGCGTA GTCGGACGCC GCTTCCGCCT CGCCCATATT GTGTTTGGCC GCGATGTGAT TGAAGTTGCC ACCTTCCGTG GTCACCACGG CGACAGTAAT GAAAAGATTT CCAAAGCCAA TGCCGAAGGG CGTTTGCTCA GGGATAACGT GTACGGTGAA ATCGATGAAG ACGCAGAGCG CCGCGATTTT ACCGTCAACG CCCTTTACTA CGATATTAGC GACTACTCTA TCCGTAGCTA TGGCGGCGGT ATGGAAGATC TTAAGGCGGG CACCTTAAGG CTGATTGGCG ATCCCGAAAC CCGTTACCGT GAAGATCCAG TGCGTATGCT CAGGGCTGTG CGTTTTGCCA CTAAGCTCAG CATGGCTATT GAAGAAGTGA CCGCTAAACC TATCAAACAG TTAGCGCCAC TGCTCAAGGA CATTCCAGCC GCCCGCATGT ATGAAGAAGT GCTCAAACTT TTCTTCGCCG GCAAAGCCAT GGCCAACTTT GAGATGATGC AGGAATATAA GCTGTTCGCG CCGCTCTTCC CGCAAGTCGA CGCCCAATTA AAAGATGCGC CAAAAGGCCC TGCGATGAAG ATGGTGCAAG CCATTATGAA GAGCACGGAT GCGCGCGTGA ACGAAGATAA GCCTGTTACT CCGTCATTCT TCTATGCGGC GATCCTCTGG TATCCACTAC GTCAACGCGC CGAAGATATC GCGGTCGAGA GCGGTCTGAC TTTATACGAT GCGTTTTTTG CCGCCATGGG TGATGTGATT GAGCAGCAAT GCCAAACCAT CAGCATTCCG CGCCGTTTTA GTACGCCCGC CAAAGACATC TGGCAATTGC AATTACGCTT CGATCGCAGC CAAGGCACAC GCGCCTTTAA ACTGTTAGAG CACCCTAAAT TTAGAGCGGC CTACGACTTA CTGTTACTGC GCGGCGAAGT CGAAGGTGGC AATGTCGCCA AGAGTGCCGC CTGGTGGCAA CAGTTTGTTG AAGCGGATGA AACCGAGCGT TTGAACATCG CCCGCAGTGG TAACAAAGCG GCGGGTAACC GTAACCGCAA TTCACCACAG CGCCGTCGCC GTCGCCCGAG TGCCGCTAAA GCCAAAGCCG CCGAATAA
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Protein sequence | MPRDAHSISR KQISENALKV LYRLNKSGFQ AYLVGGGVRD LLLGLEPKDF DVVTNATPEE IKKLFRNCRV VGRRFRLAHI VFGRDVIEVA TFRGHHGDSN EKISKANAEG RLLRDNVYGE IDEDAERRDF TVNALYYDIS DYSIRSYGGG MEDLKAGTLR LIGDPETRYR EDPVRMLRAV RFATKLSMAI EEVTAKPIKQ LAPLLKDIPA ARMYEEVLKL FFAGKAMANF EMMQEYKLFA PLFPQVDAQL KDAPKGPAMK MVQAIMKSTD ARVNEDKPVT PSFFYAAILW YPLRQRAEDI AVESGLTLYD AFFAAMGDVI EQQCQTISIP RRFSTPAKDI WQLQLRFDRS QGTRAFKLLE HPKFRAAYDL LLLRGEVEGG NVAKSAAWWQ QFVEADETER LNIARSGNKA AGNRNRNSPQ RRRRRPSAAK AKAAE
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