| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_3396 |
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| Symbol | |
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| ID | 4476739 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 4065211 |
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| End bp | 4066812 |
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| Gene Length | 1602 bp |
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| Protein Length | 533 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639728005 |
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| Product | glucose-methanol-choline oxidoreductase |
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| Protein accession | YP_871025 |
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| Protein GI | 117921833 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCAATCA TAGATCCCAT AGTGACAGGC TTAAATTCCG GTTGGTTACA TACCGACGCC
AGTCAACTGC AAGAGAACCA GCAATTTGAA GCCGATGTGG TAATTGTAGG CACGGGCGCA
GGCGGCGGTG TGGCGGCGGA AATCCTTACC CAAGCTGGAC TCAGTGTGAT CATGATTGAA
GCGGGGCCGC TTAAATCCTC CAGTGACTTT AATATGGAAG AGCGAGTCGC TTACCCTAAT
TTGTATCAAC AGGCGGCCGC GATGAAAACC GCCGATAAGG CGATTGGTAT TTTTCAAGGT
CGCGCCGTAG GCGGCTCGAC CACCATCAAT TGGACCACCT CCATTCGTAC CCCGAAGGAA
GCCTTAGCCT TTTGGGCGCA GCATAAATCC GTTGCCGGAC TCGATCCCGA GGCCCTTGCC
CCTTGGTTCG AGCAGATGGA GCAGCGGCTC AACATTCACG AATGGAATTA TGAACCTAAC
CGCAATAATG GCGCCCTCAA GCAAGGCTGT ATCAACCTAG GTTGGGATTA CACCGTCATT
AAGCGTAACG TGGCGGGTTG TTGGAATACT GGCTATTGCG GCATGGGCTG CCCAGTTAAT
GCTAAACAGT CGATGTTAGT CACGACGATT CCGACCGCAT TAGAGAAGGG TGCGCAGCTT
GTTAGCCGTG CCAAAGTCGT TAAGATTGAA CACCATAATG GCCAAGTGTT TGCCCTCAAG
GCGCAGGCGC TCGATGTTAA TTTACGGCCG ACGTCGGTCG AGCTGTTATT TAAAGCCAAA
CACTATATTT TAAGCGCTGG CGCTATCCAC ACGCCGACCT TAATGATGCG CTCCGAGGTG
CCCGATCCCT ATCAATTGTT GGGCAAGCGT ACCTTTTTAC ATCCTACAGT GCTGTCGGGC
GGCGTATTTG CCGATGCGAT TAATGCCCAC AGCGGTGCGC CGCAATCTAT CTATTCCGAT
GAATTTGTTT GGAAAAATGG CGCCGATGGC GAGTTAGGCT ACAAGCTTGA AGTGCCGCCG
GTGCATCCGA TTTTGATCGC CTCTAAGACC ATAGGTTACG GCATAAGCCA TGCCGAATTG
ATGGCGCAGT TTAATCAGCT ACAGGTCACT ATCGCCTTAA TCCGCGACGG TTATCATCCC
GATAGCCAAG GTGGGCAGGT GCATCTCACC TCGACAGGAT TTGCCTTGGA TTATCCGCTC
ACCGAGGCCT TTTGGCGGGC AGCGCGGCGG GCGTACGCCA GCATGGCCGA ATTACAATTC
TCGGCGGGGG CATTAAAAGT GTTGCCCATC AGTGATGGTA TGCCATATCT GTCGTCATGG
AAGGAGGCAA AAGAGAGCAT AGCGCAAATG GATTTAGCAC CGCTGCGCAC AGTCGTTGCC
TCGGCGCACG TGATGGGCGG TTGTCCCTTT GGTGAGGATG AAAAACTCTC TATGGTCAAT
AGTTTTGGTC AGTCACATTA TCTGGATAAT CTGTCGGTGA TGGACGGCTC AATCTTCCCG
ACCAGCCTTG GGGCCAATCC GCAGCTGTCG ATTTATGGCA TTACCGCGCG CAATGCCACG
GCGTTAGCAC AAAAGCTCAC CGATGGCCGC GAGCCGCAAT AG
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| Protein sequence | MAIIDPIVTG LNSGWLHTDA SQLQENQQFE ADVVIVGTGA GGGVAAEILT QAGLSVIMIE
AGPLKSSSDF NMEERVAYPN LYQQAAAMKT ADKAIGIFQG RAVGGSTTIN WTTSIRTPKE
ALAFWAQHKS VAGLDPEALA PWFEQMEQRL NIHEWNYEPN RNNGALKQGC INLGWDYTVI
KRNVAGCWNT GYCGMGCPVN AKQSMLVTTI PTALEKGAQL VSRAKVVKIE HHNGQVFALK
AQALDVNLRP TSVELLFKAK HYILSAGAIH TPTLMMRSEV PDPYQLLGKR TFLHPTVLSG
GVFADAINAH SGAPQSIYSD EFVWKNGADG ELGYKLEVPP VHPILIASKT IGYGISHAEL
MAQFNQLQVT IALIRDGYHP DSQGGQVHLT STGFALDYPL TEAFWRAARR AYASMAELQF
SAGALKVLPI SDGMPYLSSW KEAKESIAQM DLAPLRTVVA SAHVMGGCPF GEDEKLSMVN
SFGQSHYLDN LSVMDGSIFP TSLGANPQLS IYGITARNAT ALAQKLTDGR EPQ
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