Gene Shewana3_3390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3390 
Symbol 
ID4476733 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp4060301 
End bp4060774 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content39% 
IMG OID639727999 
Producthypothetical protein 
Protein accessionYP_871019 
Protein GI117921827 
COG category[S] Function unknown 
COG ID[COG3034] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAAAAA TAGTCATTCT ATCCATGATG ATCTCAAATC TTGCTTTCGC AGAGGTAGAT 
CTCGTTAAAG TGGATAAATC GGAGAGCAAG ATGTACTTGC TTGATGGTGA GCAGGTCATA
AAAGAATATC ATGTGGCCTT TGGTGCTAAC CCAAAAGGCC ATAAGCAAAA AGAAGGTGAT
GAGAAAACAC CCGAAGGATC ATACACTTTA GATTATAAGA AGGAAGATTC ATCCTTTTAT
AGGGCAATGC ATATTAATTA TCCAAATGCT CAAGATGAGG CCAATGCGAA GAAGTTAGGT
GTTTCTCCCG GTGGCTTTAT CATGGTTCAT GGGCAGCGTA ACAAGCTGGG CTGGCTTTCG
TTTATTACTC AGCGTTTTAA TTGGACAAAC GGTTGCATTG CTTTAACCAA TTCAGAAATG
GATGAATTCA TGGAATTAGT AAATGTCGGC ACCAAAATTG AAATTCAGTG GTAG
 
Protein sequence
MRKIVILSMM ISNLAFAEVD LVKVDKSESK MYLLDGEQVI KEYHVAFGAN PKGHKQKEGD 
EKTPEGSYTL DYKKEDSSFY RAMHINYPNA QDEANAKKLG VSPGGFIMVH GQRNKLGWLS
FITQRFNWTN GCIALTNSEM DEFMELVNVG TKIEIQW