| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_3348 |
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| Symbol | |
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| ID | 4477649 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 4016318 |
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| End bp | 4017787 |
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| Gene Length | 1470 bp |
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| Protein Length | 489 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639727958 |
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| Product | Na+/H+ antiporter |
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| Protein accession | YP_870978 |
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| Protein GI | 117921786 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1055] Na+/H+ antiporter NhaD and related arsenite permeases |
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| TIGRFAM ID | [TIGR00775] Na+/H+ antiporter, NhaD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.017498 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATTAC AGCGGTGGTT TAAAAACAGT GGAGTGGTGC TCGCTAGCCT ATTCTGCGTT
GCAATATTGA GCGGATTCTC ACCAGCAGTT TGGGCAATGA CCGAAGGAAC AGAACGGCTC
GATTTAACCG CTGCATCAGT GGGGTATATT GCCGTATGCG TCTTCGTGCT CGCCTATATT
TTGGTGATGG CCGAAGAGGC GCTGCACCTG CGTAAATCCA AACCCGTATT GGTCGCAGCC
GGCATTATTT GGGGCATGAT AGGTTTTGTG TATGTGCAAA ATGGCATGTC GGAGGTTTCC
GAGGCAGCCT TTAAGCACAA TCTACTGGAA TACGCCGAGT TATTACTCTT CCTATTAGTG
GCGATGACTT ATATCAACGC CATGGAGGAA CGTAACTTAT TCGATGCGAT CCGCGGTTGG
CTAGTCGGAC GGGGATTTAG TCTGCGAACC GTGTTCTGGC TGACGGGGTT TATGGCGTTC
TTTATCTCGC CAGTGGCCGA TAACTTAACC ACTGCATTAT TGATGTGTGC CGTGGTGATG
AAGGTCGGCG CGGGGCAGCG CAAATTTATT ACGCTGGCGT GTATCAACAT TGTGGTTGCG
GCGAATGCGG GCGGTGCCTT TAGTCCCTTT GGTGATATCA CCACCCTGAT GGTGTGGCAA
AAGGGCTTAG TGCACTTTGC TGACTTCTTC CATCTGTTTA TTCCCGCCTT GGTCAACTTT
GCCTTGCCTG CGGCGATTAT GAGCGTGTTT ATCCCACGTT ATGTGCCAGA GCCTGAAAAA
GAGCAGGTGT ACACTAAACC CGGTGCTAAA CGTATCGTGG CGTTATTCCT GCTGACCATT
GCGACGGCGG TGTGTGCTCA TTCCTTCTTC GGCATGCCAC CTGTGCTTGG GATGATGACG
GGTCTGGGCT TCCTGCAGTT CTTCGGTTAT TACCTGCGTA AGACCTTCGA TAAATCCGTT
GCTCGTGAGC GTGCGAAGGC GGAATTACGT CAGGATAAAC AACGGCTACA ACAACTTGGC
AGCGTGGTGC CCTTCGATGT GTTTAGCCGG ATTTCCCGCG CCGAATGGGA TACCTTACTG
TTCTTCTACG GTGTGGTGTT ATGTGTGGGC GGCCTTGGCT TTATGGGGTA TTTAAGCTTA
GTGTCTGAGG CACTGTATTC CCATTGGGAT GCAACCTATG CCAACGTGGC TATCGGTCTG
TTGTCTTCCA TTGTCGATAA CATTCCAGTG ATGTTCGCCG TGTTGACCAT GAACCCAGAG
ATGGCCCTCG GTCAATGGTT ACTGGTGACC TTAACCGCGG GCGTTGGGGG CAGTTTGTTA
TCCATCGGCA GTGCGGCAGG GGTTGCCTTG ATGGGACAGG CGAGGGGGAT TTACACCTTC
GGCGCCCATT TACGTTGGAC GCCTGTGATC GCGCTTGGCT ATATTGCTAG CATTTTGGTA
CATATGTGGC TCAATGCGGC AATGTTCTAA
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| Protein sequence | MKLQRWFKNS GVVLASLFCV AILSGFSPAV WAMTEGTERL DLTAASVGYI AVCVFVLAYI
LVMAEEALHL RKSKPVLVAA GIIWGMIGFV YVQNGMSEVS EAAFKHNLLE YAELLLFLLV
AMTYINAMEE RNLFDAIRGW LVGRGFSLRT VFWLTGFMAF FISPVADNLT TALLMCAVVM
KVGAGQRKFI TLACINIVVA ANAGGAFSPF GDITTLMVWQ KGLVHFADFF HLFIPALVNF
ALPAAIMSVF IPRYVPEPEK EQVYTKPGAK RIVALFLLTI ATAVCAHSFF GMPPVLGMMT
GLGFLQFFGY YLRKTFDKSV ARERAKAELR QDKQRLQQLG SVVPFDVFSR ISRAEWDTLL
FFYGVVLCVG GLGFMGYLSL VSEALYSHWD ATYANVAIGL LSSIVDNIPV MFAVLTMNPE
MALGQWLLVT LTAGVGGSLL SIGSAAGVAL MGQARGIYTF GAHLRWTPVI ALGYIASILV
HMWLNAAMF
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