Gene Shewana3_3338 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3338 
Symbol 
ID4477639 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp4003792 
End bp4006995 
Gene Length3204 bp 
Protein Length1067 aa 
Translation table11 
GC content51% 
IMG OID639727948 
Productacriflavin resistance protein 
Protein accessionYP_870968 
Protein GI117921776 
COG category[V] Defense mechanisms 
COG ID[COG0841] Cation/multidrug efflux pump 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATACAC AAAAAGGGAT CTTAGCCTGG TTTGCCCGCA ACAGCGTGGC AGCCAACCTG 
TTAATGTGGG CGCTGCTGAT TGGCGGTCTA TTTAGCACAG TATTGATTAA TAAAGAGGTA
TTTCCCTCTT TTAACCTTAA CTTATTGAGC ATTACCGTTG CTTATCCCGG CGCTGCGCCG
CAGGAAATCG AAGAAGGCAT CAACATTAAG ATTGAAGAAG CCATCCAAGA TATCAACGGC
ATTAAAAAAG TCACTTCGGT TGCCAGTGAA GGCGTCGGCG CCATCACGGT CGAAGTCGAA
GATGACTACG ACGTGCAAAC CGTACTCGAC GAAGCCAAGT TGCGATTGGA CGCGATTTCC
ACCTTTCCGG TGAACATCGA AAAACCGCAA ATCTTTAAAA TCGAACCCGA AAACAACGTG
ATTTGGGTGT CGGTCTACGG TGATATGTCG CTGCACGATA TGAAGGAACT GGCCAAATCG
GTACGTGATG ATTTGACCCA ACTCCCTTCT GTGACCCGCG CGAAAGTCAC AGGGGTGCGC
GACTATGAAA TCGGTATCGA AGTCTCGGAA GATAAGCTGC GGGAATACGG CTTGACCTTC
TCGCAAGTCG CCTTGGCGGT GCAAAACTCT TCTATCGACT TGCCGGGCGG TTCGATCCGC
GCAGAAGATG GCGATATTCT GCTGCGTACT AAAGGCCAAG CCTATACCGG CGATGATTTT
GCCAATATCG TCGTCACCAC GCGCACCGAT GGTAGCCGGG TGATGTTGCC CCAAGTGGCA
ACCATTAAGG ATGATTTTGA AGAACGTTTA GAGTACACCC GCTTCAACGG CAAGCCTGCA
GCGATTATCG AAGTGACCAG CGTGAACGAT CAAAACGCCC TCGACATTGC TCAACAGGTT
AAAGACTACG TCGAGAAACG CCGTGCCACT CTGCCAGCCA ATGCACAATT AGACACTTGG
GGAGACTTAA CCCACTACCT CAAGGGCCGC TTAAACATGA TGATGTCGAA CATGTTTTAC
GGCGCCCTAT TAGTGTTTGT GATCTTAGCC CTGTTCCTCG ACCTCAAACT CGCCTTCTGG
GTAATGATGG GGTTACCCGT GTGTTTTCTC GGCACTATGC TGATCATGCC GCTGGAACCT
TTCTCCATGA CCATCAACAT GCTGACATTG TTCGCCTTTA TTCTCGTCTT GGGGATAGTC
GTCGACGATG CAATTGTGAT AGGTGAAAGT GCCTACAGCG AGGTCGAACG GCACGGACAC
TCGATTGATA ACGTGATCCG CGGCGCGCAA AAGGTGGCTA TGCCCGCCAC CTTCGGGGTG
TTAACCACTA TCGCCGCCTT TATCCCTATG TTGATGGTTT CTGGCCCCAT GGGGATTATT
TGGAAATCCA TCGGCATGGT GGTCATCATG TGTCTGGCAT TTTCACTGGT GGAATCTAAA
TTTATCCTGC CAGCGCACTT AGCCCACATG AAGTTTAGAA AGCCGGGGGA ACCCACGGGT
TTCTTTGGTC GCTTCAAGGA CAGATTTAAT AATCACGTTC AACACTTTAT TCACCATAGT
TACCGCAACT TCCTCGAGCG CTGTATCCAA CATCGCTACA ACGTCGTCGC GGCCTTTATC
GGTGTGTTGA TTTTATCCAT AGCCTTAGTC GCCAGCGGCA AAGTACGCTG GGTGTTCTTC
CCCGATATTC CATCGGACTT TATCCAAGTA CAGCTAGAGA TGGATGAAGG CAGCTCAGAG
CAAAACACCC TCAAAGTGGT ACAGGATATT GAAGAAGCCC TGTACAAGAT GAACGCAAAA
ATGGAGAAGG ACAACGGCAG CGAAGTGGTG AAGCACAGCT TTATCAACAT GAGCTCGCGC
ACCTCCGCCT TTATCTTTGC CGAACTGACC AAGGGTGAAG ACCGGGATGT GGATGGCGAG
ACGATTGCCG CTGCATGGCG CGAACAATTA CCCGAGTTAC TGTCGGTGAA GAAGCTCGAT
TTCAACGCCA GCGGTAACGG CGGAGGCGGT GGTGACATCT CCTTTAGATT AACCTCGAGC
GATCTCGAAG AATTATCCGC AGCCGCCCGC GAGCTTAAGC AAAAGCTCGC CACCTACGAA
GGTGTGTACG ACATTGCCGA TAACTTCTCC TCGGGTAGCC ATGAGATCCG TTTAAAGATC
CGCCCCGAGG CCGAAGCGCT GGGTTTAACC TTGTCAGATT TAGCACGCCA AGTCCGTTAT
GGTTTCTATG GTTATGAAGC ACAACGTATT TTGCGTAATA AAGAAGAAAT CAAAGTCATG
GTGCGCTACC CCTTAGAGCA GCGCCGTACC GTTGGCTACC TCGAGAATAT GTTGATCCGC
ACGCCGCAGG GCAAGTCGGT GCCTTTCTCA ACCGTTGCTG AAGTCGAAAA AGGCGAATCC
TACGCCTCAA TCACCCGTGT CGATGGCAAG CGAGCAATTA CCATTATTGC CAATGCCAAC
AAACACAAGG TGGAGCCTTC CAAGGTTGTG AATGAAATCC AACAGGATTT CCTGCCGCAG
TTACAGGCCA AGTATCCGAA AATCCAAACC ACCCTCGATG GCGGCAGTTT GGATGAGCAG
AATGCCATGG TCGGTCTAAT GCAGGGCTTC TTCTTTGCGC TGTTTACCAT TTATGCCTTA
ATGGCGGTAC CGCTCAAGTC TTACAGCCAG CCGCTGATCA TTATGTCAGT CATCCCCTTC
GGGATTATCG GCGCCCTGTT TGGGCATTTG ATCCAAGGCC TTGCCATGAG CGTCTTGAGT
CTGTGTGGTA TCGTCGCGCT CGCTGGGGTA GTGGTAAACG ACTCCTTGAT TCTGGTGGAC
TTTGTTAACC GGGCGCGGGA GCAAGGGCAA TCGGTCAGAC AAGCGGCGGT GGATTCAGGC
TGCTATCGTT TCAGGGCGAT TATCTTGACC TCGTTAACCA CCTTCGTCGG TCTTGTGCCT
ATCATTCTTG AACGCAGCTT ACAGGCGCAG ATTGTGATCC CTATGGCGAC CTCCCTCGCC
TTCGGTATCC TATTCTCGAC TGTGGTGACC CTAATTTTGG TGCCTTTGCT GTACATCATT
CTTGATGATG TTAAACGTAC TTCTAGCCGC TTTTACCACT GGTGGTGGCG CCCAAAAACA
TCGCAGGAAA GGCATTTACC TGCCAATGAG AGCCACAAGG TATCCTTAGA TGCCTTTAAT
GCACCTGACT ATAAACAGGA TTAG
 
Protein sequence
MDTQKGILAW FARNSVAANL LMWALLIGGL FSTVLINKEV FPSFNLNLLS ITVAYPGAAP 
QEIEEGINIK IEEAIQDING IKKVTSVASE GVGAITVEVE DDYDVQTVLD EAKLRLDAIS
TFPVNIEKPQ IFKIEPENNV IWVSVYGDMS LHDMKELAKS VRDDLTQLPS VTRAKVTGVR
DYEIGIEVSE DKLREYGLTF SQVALAVQNS SIDLPGGSIR AEDGDILLRT KGQAYTGDDF
ANIVVTTRTD GSRVMLPQVA TIKDDFEERL EYTRFNGKPA AIIEVTSVND QNALDIAQQV
KDYVEKRRAT LPANAQLDTW GDLTHYLKGR LNMMMSNMFY GALLVFVILA LFLDLKLAFW
VMMGLPVCFL GTMLIMPLEP FSMTINMLTL FAFILVLGIV VDDAIVIGES AYSEVERHGH
SIDNVIRGAQ KVAMPATFGV LTTIAAFIPM LMVSGPMGII WKSIGMVVIM CLAFSLVESK
FILPAHLAHM KFRKPGEPTG FFGRFKDRFN NHVQHFIHHS YRNFLERCIQ HRYNVVAAFI
GVLILSIALV ASGKVRWVFF PDIPSDFIQV QLEMDEGSSE QNTLKVVQDI EEALYKMNAK
MEKDNGSEVV KHSFINMSSR TSAFIFAELT KGEDRDVDGE TIAAAWREQL PELLSVKKLD
FNASGNGGGG GDISFRLTSS DLEELSAAAR ELKQKLATYE GVYDIADNFS SGSHEIRLKI
RPEAEALGLT LSDLARQVRY GFYGYEAQRI LRNKEEIKVM VRYPLEQRRT VGYLENMLIR
TPQGKSVPFS TVAEVEKGES YASITRVDGK RAITIIANAN KHKVEPSKVV NEIQQDFLPQ
LQAKYPKIQT TLDGGSLDEQ NAMVGLMQGF FFALFTIYAL MAVPLKSYSQ PLIIMSVIPF
GIIGALFGHL IQGLAMSVLS LCGIVALAGV VVNDSLILVD FVNRAREQGQ SVRQAAVDSG
CYRFRAIILT SLTTFVGLVP IILERSLQAQ IVIPMATSLA FGILFSTVVT LILVPLLYII
LDDVKRTSSR FYHWWWRPKT SQERHLPANE SHKVSLDAFN APDYKQD