| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_3337 |
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| Symbol | |
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| ID | 4477638 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 4002575 |
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| End bp | 4003792 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 639727947 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_870967 |
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| Protein GI | 117921775 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAAAA CTTTACTCAG GAGATTATCT CCTCTGTTTA TACTGCTGTT ATTTGTTGTT
GGCGCAATAG CACTGATGTC AACCAAGGAA GCCCCCGAAC AAAAGCCCGA AGAAATGCCC
GTGCCTATCG TGGATGTGAC TCAGGTTGAG CAGCAAACGG TATCGCTTAA TCTTCCTTCC
TACGGCGTGG TTACCCCTAA ATATAAGACG CAACTGGTCA CCGAAGTCCA AGGGCGGATG
CTGAGCATTT CCCCGCAATT TGTGGCCGGT GGCATAGTGA AGAAAGGCGA TCAATTAGCC
CAAATCGAAC CTTCGGATTA CGAAGCCGAT TTAATGCAAG CCGAAGCCAC CTTGGCTCAG
GCAACCGCGG CACTGAATGA AGAAATCGCC CGTGGCGAAG TCGCTAAAAT CGAATTTAAA
GGCTACGACA AAGGCTTGCC GCCAGAGCTG GGGTTACGTA TTCCACAGCT GAAAAAAGAA
CAAGCCAACG TGAAATATGC CCAGGCAGCA CTGGCACGTG CGCAGCGTAA CTTAGAGCGT
ACAGTCATTC GCGCCCCCTT CGATGGCATT ATCAAAGCTA GAAATGTCGA TTTAGGTCAG
TACGTTACAT TAGGCACTAA CCTAGGCGAG CTTTACGACA CTAGCATTGC CGAAATTCGT
CTCCCTATCT CTAACGATGA TTTAGCCTAT TTAGAATCCG TCGATCACCC CGATACCCAA
GTCACCTTAA GCGCCTCTTT GGCGGGTAAG GAAAACACTT GGATGGGTAA TATTATTCGT
AGCGAAGGCG TGATTGATGC CGATAACCGC ATGGTTTACC TCGTGGCCGA GATTAAAGAC
CCTTACCTGC GTGAGCACAA AACCCAAGGC AGTTTACCGC TGAAATACGG CAGCTTTGTC
AACGCCGTAA TTAAGGGGCG CTCTGTCGAT GGTATTGTCA AACTGCCTCG CCACGTAGTG
CGTAATGAGC ATGTTGCCTT AGTTAATGAG CAAAATATTG TTGAGATGCG CCATGTAAAT
GTGGTGCGTA GCGATCTTGA AAATGTGTTT ATCAAGGACA GCTTAAAAAC CGGTGAGCGC
GTTGCCATCA CTCACTTTAG CAATATGGCG AATGGCCAGT TGGTCAAAAT CATAGGTGAA
GATGCCAAGC CAGTGCAGAC ACCCACGCCT AAGGAAGATG CTCCTGAGTC GAGTCTTGCG
GCCGCTGGAG TGAACTAA
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| Protein sequence | MMKTLLRRLS PLFILLLFVV GAIALMSTKE APEQKPEEMP VPIVDVTQVE QQTVSLNLPS
YGVVTPKYKT QLVTEVQGRM LSISPQFVAG GIVKKGDQLA QIEPSDYEAD LMQAEATLAQ
ATAALNEEIA RGEVAKIEFK GYDKGLPPEL GLRIPQLKKE QANVKYAQAA LARAQRNLER
TVIRAPFDGI IKARNVDLGQ YVTLGTNLGE LYDTSIAEIR LPISNDDLAY LESVDHPDTQ
VTLSASLAGK ENTWMGNIIR SEGVIDADNR MVYLVAEIKD PYLREHKTQG SLPLKYGSFV
NAVIKGRSVD GIVKLPRHVV RNEHVALVNE QNIVEMRHVN VVRSDLENVF IKDSLKTGER
VAITHFSNMA NGQLVKIIGE DAKPVQTPTP KEDAPESSLA AAGVN
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