| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_3335 |
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| Symbol | |
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| ID | 4477636 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 3997279 |
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| End bp | 4000647 |
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| Gene Length | 3369 bp |
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| Protein Length | 1122 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639727945 |
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| Product | multi-sensor hybrid histidine kinase |
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| Protein accession | YP_870965 |
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| Protein GI | 117921773 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
[COG3300] MHYT domain (predicted integral membrane sensor domain)
[COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCTTGG AACATATGGC TTTTGATTGG TTATCGCAGT TTTTTATTTT TTCCCACGAC
AGCCTATTGC TGAATGTCTA TTACAATCCC TTGTTAGTCA CTATCTCTAT TCTGATTGCG
ATTTTTGCAG CCTTTATGGC CTTTCAGGTG ACGACTCAAG CGGTGCAGAG CCAATCGAGA
GCACGCCAGC AGAGCATGCT ACTGACTGGG AGTTTAGTCC TTGGCGGCGG TGTCTGGTCG
ATGCATTTTA TCGGTATGTT GGCCTTCGAT TTATGTTCGC CCGTGAGCTA TGACTTTGGC
CTCACTGCGC TATCCCTATT GCCCTGCATA GGTGCCTCAT GGGTGGCGCT TAACCTGCTA
TCTAAACCGA GTTTTCAGTT TTCCCAAGTC TTGCTGAGCG GCACCTTAGT GGGCGCCGGA
ATTGGCACTA TGCACTATGT GGGCATGGCT GCGATGGAGA TGGCGCCATT GCTGCGTTAC
GACCCATGGA TTTTTGCCCT GTCGATTGTG GTCGCCGTGC TATTAGCCAT TATTGCGCTG
TGGGTTCGTA CTGGGTTGAA TCAGCTTATC TCCTCCAACA TGAGCACCAT TACGAGTAAT
TTTATCGCCA GTATCGTCAT GGGATTAGCG ATTTCGGGCA TGCATTACAC TGGCATGGCG
GCGGCGCGTT TTGTTAGACC CGAAGGTTTG GAACTGAGCC AGCAGACCTC GGAAATCTCA
TTCTATCTCG CGCTCGGCGT CTCGGTGATC ACCACTGCAA TTATCTGCTT AGTGCTGATT
GTGAATGTGA TCTTTAAGTA TAAAGACCTG TCTTTACTCG CAAAATCCAA TGAAGACCGC
ATGCGCGCCA TGATGAATAC CGCCGTCGAT GGCATTATCA CAATCGATGG CCAAGGTATC
ATAGTGAATG TGAACAAGGC GGTGACCACG ATTTTAGGCT GGTCTCCTGC CGAACTGCTT
GGGGCGAATG TGAAAAAAAT CGTCCCTGAG GCGATTCGGC CGCACCACGA TGGCTATTTA
GCTAGGTATG CACAGACCCG CGAAGCGCAA ATTATTGGCA CGGGGCGAGA GGTCGAAGCG
CAACATAAGG CGGGTCATTT AGTGCCAGTG CGCCTGAGTA TCGGCCATGT GATGCAGGGC
AAAGCCCATT ACTTTGTCGG TTTCATCTCC GATCTCAGCC AACGCAATGA GATGGAGCAA
GAGCTAAAAA TCAATGAGGC CAAGTTTCGC TCGCTGATCA CCAATATCCC AGGCATTGCC
TATCGCTGTA AAAGCACCGA GGGCTGGCCC ATGGTATTTA TCAGCGACGC GGTGCAGAAC
ATCACTGGCT ATCCCGCCGA AGACTTTGAA CTCCCCCATC CGAAACGTTT CTTCTCGGAT
CTCTATCATC CGGACGATAT TGAAACCATT TACGCCCAAG CGCAGCCACC GACCTTTTCG
ATGGAATACC GCATTATTCG CGCAGACGGT GGGGTACGTT GGCTGTTTGA ACACGGCAAT
TACATCCTCG ATGAAACCAG CAAAGAGGTG TGGATTGATG GCTTCCTGAT GGATATCACC
GAGCGTAAGG AGATGGAACA GGACTTAGTG ACGGCAAAGA ATAATGCCGA GCAGGCGGCA
GCGGCGCGTG CGGCCTTCTT GGCCAATATG AGCCACGAGA TCCGCACGCC AATGAATGCC
ATCATCGGCT TTAGCGACAT TCTGTTGGAG TCGGTATTAG ACCTTGAACA ACAAAAACAG
CTCTCTACCA TCAATCGCTC CGCCAAATCC TTGCTGCACC TACTCAACGA TGTGCTCGAT
AGCGCCAAGC TCGACAAGGG CAAACTCGAG TTAGAAAACC GAGTGTTTTG CTTAACCGAT
GAAATCGATA CTGTGATTTC AACCCTGTGG TTGCAGGCGA AGAAGCAGCG TTTATCCCTC
GAGGTCGATG TTGCGCCGAC GATGGCGGCA AACTTTATCG GCTCTCCGGA GCGTATCCGC
CAAGTGCTGA TCAATTTGAT TGGCAACGCG GTTAAATTTA CCTGCGAGGG GACGGTGACG
GTCAGAGTCT TTCCACAAGA TACGACCCAA GATACGACCA AAATCACCTT CGAGATTATT
GATACTGGAA TTGGCATGTC GCCTGAGCAG CTTAATCGGG TATTTGAAGC GTTTGCCCAA
GCCGATGCCT CCATGAGTCG CAAATACGGT GGCACAGGAC TTGGGACGAC CATCAGTAAG
CAGTTGGTCG AATTGATGGG CGGAGAGCTC ACCGCCGAAA GTACCTTAGG TCAAGGCAGT
ACATTCCGCT TTACCATTCC CTTGCAACCT AGCTCTGAGC CGCTATCGAC CCAGCGCGCC
GACAATGGCT CATTACCGCC TCTGACGCTA CTTGTGGTCG ATGATATTCA ACAGAATATC
GATCTATTGT CCGTATGGTT AACCCGCCAA GGGCATAAAG TGATCACTGC CCGCGATGGC
GAACAGGCGC TGCTGCGGAT GCAAAAAGCC GACATCGATA TCACCTTGAT GGACCTGCAA
ATGCCGGTAA TGGATGGATT AACGGCGGCG AAGATGCGCC GTGAGCAAGA GGCTGAATCT
CAATTACCCC ATATGCCAAT TATTGCCTTA ACCGCGAGTG TGCTCGAGCA AGACAAGAGC
GCCGCCGAGC AGGCGGGTAT GGATGGCTTT GCCAATAAAC CCATCGATTT TGCGCTGCTG
ACGCGGGAAA TTGCCAGAGT GTTGCAACTT AATCCGCCTC AAGCCGAGTT TGAATCTTTG
CCGCCTGTGA GCACGCTATT AGTCGATGAA GCCAAGGGCG TGAAATTGTG GGGTTCTAAA
CCCCTATTTA TCAAAGAATT GATGAAGTTT ATTGCCCAAT GGCCAGAGAA AAGCCAAGCG
TTACAACAGG CAATGAGTGG GCAAGATACG GCAACAATTA AACTCTTAAG CCATAGTTTG
AAAGGGGTTA GCGGTAATCT GGGGCTGCTG CAATGGATGG CGCACTTTGG CCAGTTAGAG
CAGTTGGCGC AAGCTGAGTC GCCCTCACGT GAAGCCATGG AGGCCATAGT TGCTCAGATT
AGCGACTCTC TCGTCGAGAT TGGGGATTAT ATCGAGAGCA CTACAGTGCC CGCGGCAGCA
GTATCCGCTG CTGTCCATGC GGGGACTGGC GATCCCGCAC AATTATTAAC GCATATTGAT
GCCTTGCTGG CATCGATTGC GCACCATAGT TTTGAAGAGT CTGATCTTGA AGCGCTCACC
GCTCGTATTG ATGAGTCTCT ACGTCTGAGA GCGGCCATTA TTGCTGAGGC GCTAGACAAC
TTTGATTTTG ATATTGCCCA TAATGAATTG ACCGAGTTAC GGCGTTTTAT CACCGCGAAT
AAGGAGTAG
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| Protein sequence | MGLEHMAFDW LSQFFIFSHD SLLLNVYYNP LLVTISILIA IFAAFMAFQV TTQAVQSQSR
ARQQSMLLTG SLVLGGGVWS MHFIGMLAFD LCSPVSYDFG LTALSLLPCI GASWVALNLL
SKPSFQFSQV LLSGTLVGAG IGTMHYVGMA AMEMAPLLRY DPWIFALSIV VAVLLAIIAL
WVRTGLNQLI SSNMSTITSN FIASIVMGLA ISGMHYTGMA AARFVRPEGL ELSQQTSEIS
FYLALGVSVI TTAIICLVLI VNVIFKYKDL SLLAKSNEDR MRAMMNTAVD GIITIDGQGI
IVNVNKAVTT ILGWSPAELL GANVKKIVPE AIRPHHDGYL ARYAQTREAQ IIGTGREVEA
QHKAGHLVPV RLSIGHVMQG KAHYFVGFIS DLSQRNEMEQ ELKINEAKFR SLITNIPGIA
YRCKSTEGWP MVFISDAVQN ITGYPAEDFE LPHPKRFFSD LYHPDDIETI YAQAQPPTFS
MEYRIIRADG GVRWLFEHGN YILDETSKEV WIDGFLMDIT ERKEMEQDLV TAKNNAEQAA
AARAAFLANM SHEIRTPMNA IIGFSDILLE SVLDLEQQKQ LSTINRSAKS LLHLLNDVLD
SAKLDKGKLE LENRVFCLTD EIDTVISTLW LQAKKQRLSL EVDVAPTMAA NFIGSPERIR
QVLINLIGNA VKFTCEGTVT VRVFPQDTTQ DTTKITFEII DTGIGMSPEQ LNRVFEAFAQ
ADASMSRKYG GTGLGTTISK QLVELMGGEL TAESTLGQGS TFRFTIPLQP SSEPLSTQRA
DNGSLPPLTL LVVDDIQQNI DLLSVWLTRQ GHKVITARDG EQALLRMQKA DIDITLMDLQ
MPVMDGLTAA KMRREQEAES QLPHMPIIAL TASVLEQDKS AAEQAGMDGF ANKPIDFALL
TREIARVLQL NPPQAEFESL PPVSTLLVDE AKGVKLWGSK PLFIKELMKF IAQWPEKSQA
LQQAMSGQDT ATIKLLSHSL KGVSGNLGLL QWMAHFGQLE QLAQAESPSR EAMEAIVAQI
SDSLVEIGDY IESTTVPAAA VSAAVHAGTG DPAQLLTHID ALLASIAHHS FEESDLEALT
ARIDESLRLR AAIIAEALDN FDFDIAHNEL TELRRFITAN KE
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